MXO03144.5prime Sequence
802 bp (526 high quality bases) assembled on 2007-05-24
> MXO03144.5prime
CAATCGACATGTTGCCCACGGACAAGGGCAGTTTGACGGCCGGCAGGCCG
CAAAAATCTCATTGCCATGGATCGGTATCCGTGTCGGATCAGCAGCTCCT
GCAGCACCTCCATCCACACACGCATCCGCGTCCAGTGCACCTGCCACCCG
CACATGCCACACACTCACCCGCCTGCGAGAAGCGCTTGGAGGCGGAGACG
CCGCGCCGGGATCTCCACGAGCTGCTGCTCGAGCTGCTGGACATGATGAT
GTCCTGCCTGGTGGTGGCTCCCTGTGTGATCGCCTACTGGCGTGGCACCT
GGGAACTGATGTTCGTCTACCTGTTTCCCGGCAGCTTGCCGCTGTCTGCG
ATGGCCAGCTTTCTGATCGGCGGACTGGGGCACTTCTTCTTCACAGTCAC
ACAGAACTTCTTCAAGGAGCACATCCATCCGGACCGGAGGCGACTCACAT
ACTACGCCGTATCGCGTCTCTATACGGCCGTATTCGGCATCGTTTGCATG
AATATGTGGCGTGGTGCCTGGCTGCTCTGAGATTGGCTGACCAGTGTGGA
CTCTCTGATCATTGTGTCCGTGGTCACGGCCATCGCGCTCATCTTTCTGG
TAGCCACACGCACTCTGCGGAACCTCGGAGCAGCTCCCTACACCGTTACC
ATGGATCACAAGAGTGACTACTTTGAGGTGGACACCATGTTCAAAATACC
CAGTTTTCATCAACCTGGCCTTTACATTTTGGACACCCTCTTCTCGGTCT
TTGTGATCGGCAGCCTGATGGTCATCGCTTGTCGCGGCGTCTGATGAATC
TT
MXO03144.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:32:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14021-PB | 1362 | CG14021-RB | 1..785 | 9..793 | 3800 | 99.3 | Plus |
| CG14021-PA | 1362 | CG14021-RA | 1..785 | 9..793 | 3800 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:00:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fusl-RF | 2908 | CG14021-RF | 1145..1942 | 5..802 | 3870 | 99 | Plus |
| fusl-RE | 2754 | CG14021-RE | 991..1788 | 5..802 | 3870 | 99 | Plus |
| fusl-RD | 2703 | CG14021-RD | 940..1737 | 5..802 | 3870 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:00:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5331722..5332418 | 701..5 | 3440 | 99.6 | Minus |
| 2L | 23513712 | 2L | 5331560..5331659 | 802..703 | 440 | 96 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:00:52 has no hits.
MXO03144.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:32:58 Download gff for
MXO03144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14021-PA | 1..794 | 9..802 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:06 Download gff for
MXO03144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fusl-RD | 935..1737 | 1..802 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:39:44 Download gff for
MXO03144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fusl-RD | 935..1737 | 1..802 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:39:44 Download gff for
MXO03144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5331560..5331660 | 702..802 | 95 | <- | Minus |
| 2L | 5331722..5332419 | 1..701 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:06 Download gff for
MXO03144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5331560..5331660 | 702..802 | 95 | <- | Minus |
| arm_2L | 5331722..5332419 | 1..701 | 99 | | Minus |
