MXO03152.5prime Sequence
874 bp (754 high quality bases) assembled on 2007-05-24
> MXO03152.5prime
CAGTCGACATGTTCCGCATGAGGCCAGATATTAAAAATTTTTACATTGAG
CGTGGTGTGGCGTACACCGAAGATCGCGAGGTTGTGCGACAGCTGACGAT
CTCCGGGAGTAGGCGGTTTTTGAAGTACCAGCTCCTGAAGTACTTCTCGA
TTTTCGGAAAAGTAGAGAAACTCCATTGGAAAAAGAAAAAAAGATCGGGA
TCGGTTCTTTTTTATGAGGCTACCCATGCGGCAAAGGCTTTGTATTGTAC
TAAGCACACTATCGATGGACATGATCTTTATTTACAGGCCAGCACCTCCT
GGCACCCAACGCCGGTGGAGGAATCAGGAACTCTTTCTGCCTACGATCTA
CCCATTACCGATGACATTTGGTGGAAAGTGCTCGATTATCTATCACTAAA
TGAACGTCTCAACTTTGCCGCCAGTTGTGAAAGATTCCAGGCGATCTACG
AATTGGATTCGCATCGGATCAATCATGTTCTTAATATGAAGGACGTTTGC
ACACTGACCCACCGGGTCATTAAAAGATTGATGCTGCTATCAGGAAAACA
CATTCATTGTGTAACAGGTGGCCCGCTTCATCCGAATTGGCCGTATTTGA
CCGAGTTTGTGCAGCTGTTGGGTGTAAGCTGTCCCAATCTAACAGAGCTA
AGCTTCTTCAAAATTTCTGTCAGCCTAGCCCACATGACTCACCTGTTCGA
TGGTGCCAATGGGTTGATTAATATTACCAACATATCCTTGAGGCGTTGTA
ACCTGAAAGATGCTCACATTTACTGCTTGCAGATGCTATCGAAACTAAAG
AGTCTGGACATCAGAGAAAACTTTAGTATTAAAGGCGACAGTTTAAAATC
TCTGCCAATTTCCTTGCAAATTTT
MXO03152.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:33:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-PA | 1488 | CG14891-RA | 1..858 | 9..866 | 4290 | 100 | Plus |
| CG14891-PB | 1011 | CG14891-RB | 1..381 | 486..866 | 1905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14891-RA | 1644 | CG14891-RA | 17..882 | 9..874 | 4300 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16571531..16572396 | 9..874 | 4300 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:56:43 has no hits.
MXO03152.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:33:34 Download gff for
MXO03152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-PA | 1..866 | 9..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:41 Download gff for
MXO03152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 12..882 | 1..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:31:46 Download gff for
MXO03152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14891-RA | 12..882 | 1..874 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:31:46 Download gff for
MXO03152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16571526..16572396 | 1..874 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:41 Download gff for
MXO03152.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12397248..12398118 | 1..874 | 99 | | Plus |
