MXO03157.5prime Sequence
747 bp (747 high quality bases) assembled on 2007-05-24
> MXO03157.5prime
CAGTCGACATGCTGACCCGCGTGTTCCCCCTAGTGCACGACAGGCGCCTG
AGTGTGCCTGTCCTGCGTTGCTTCCACCACGAGTTCTCCAAGCCGCCACA
ACAGGCAGCGAAGGGCCAGGAAATCGAAGGCAATCCCGAAAAGACTTTGG
TTGCCGGCGTGCAAGACAAGTACAAAATATTCCGCGATGAGGAAGCCACG
GAGATTTTTGATGTGGAAGAGGCACGCCACCAGGAGCAGCAACTTCCAGA
GCCGGACCTGGAGCTGGATCACTATTACGGCCTCAATTTAAAGCGAGGTG
TTCGCGGAGTGTTCGACGTTGAGGACTTGGTGGAGCTGCTCCGCAAGGAG
AATGTGGACGACATATTCGTCTGCTACGTGCCGGAGAACCTGAAGTACGT
TGACCACCTGGTGGTTTGCAGTGGTCGCAGTTACCGACACATGCTGTCCA
CCGCGGAGTTCGTGCGCCGAATGTTCAAGATCAAGCGGGGCAAGGGTGAC
ATATTGCCGCGCATCGAGGGCGATAAGAGCCGGGATTGGATGGCCATGGA
CTTGGGCAACATTGCCCTGCACATATTTTCACCGAGTGCTCGCGAGGAAT
ACGATCTGGAGTCGCTGTGGGCCATTGGCTCCGAATTCGACCGCGAAAGC
CAAAAACCCACCAATCCCTATGGCGATATTTTCATGGCTCAAACACCCCT
TTCTTTCGTAGACAAATCGAAACTAAAGACGGCAAGCTTTCTAGACC
MXO03157.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:34:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9166-PA | 726 | 312-RA | 1..723 | 9..731 | 3590 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 312-RB | 873 | CG9166-RB | 71..793 | 9..731 | 3600 | 99.9 | Plus |
| 312-RA | 1618 | CG9166-RA | 71..793 | 9..731 | 3600 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1351186..1351472 | 9..295 | 1420 | 99.7 | Plus |
| 3L | 28110227 | 3L | 1351529..1351790 | 295..556 | 1310 | 100 | Plus |
| 3L | 28110227 | 3L | 1351852..1352028 | 555..731 | 885 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:18:27 has no hits.
MXO03157.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:34:07 Download gff for
MXO03157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9166-PA | 1..726 | 9..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:16 Download gff for
MXO03157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 312-RA | 64..796 | 1..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:26 Download gff for
MXO03157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 312-RA | 64..796 | 1..735 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:26 Download gff for
MXO03157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1351179..1351471 | 1..294 | 98 | -> | Plus |
| 3L | 1351529..1351789 | 295..555 | 100 | -> | Plus |
| 3L | 1351853..1352031 | 556..735 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:16 Download gff for
MXO03157.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1351179..1351471 | 1..294 | 98 | -> | Plus |
| arm_3L | 1351529..1351789 | 295..555 | 100 | -> | Plus |
| arm_3L | 1351853..1352031 | 556..735 | 98 | | Plus |
