MXO03161.5prime Sequence
827 bp (772 high quality bases) assembled on 2007-05-24
> MXO03161.5prime
CAGTCGACATGTTGCCAAATTTCGAAGTTATTGCACCGAATTGCACAATG
ATTGGGATGGCTGACAGCGCGGAGGGGGTTACCCAGGAAGACAGCCACAC
GGAGTCGAGGGCAGACGGCATCAGCGGGTCCTTGCGCTCCCTGGGCACAT
ATACCCAGGAGTCCACAGAGCCGGCTTTGAGTCCGGCGGACCTTCCCGCC
CGCAGCCGGAAGGCCTTTCTGCGGCACATGATCGGCCAGCTGGCGGAGCC
CGTGCAGAACCGCATACGGGCACTGCGGCACAATCAGCTGCAACAGGTAC
GCATTTCGGAGCAGTTCTTCCGGGAAGTCTACGAGCTGGAGCGACGTTTC
TACGGCCAGAGCTGCGCGCTCTTCGATGCGAGGCGGGATATTTTGGAGGG
TTCGGTGGAGCCACCGATCCAAACGGAGAAGACCTGGCCCGAGGACCCGC
AGGATGCTCTGTACCTGGACTTCGGGAACAACGAGGAGCTGCGACAGCTG
AGGCAAAAACTGGCTCCGGTTTCGCCGACTACGCTGGGTGTTCCACGCTT
TTGGCTGACAGTTTTCCAGAACGTGCCCCTGCTCTCGGAGTTGGTCCAGG
ATCACGACGAGCCGCTTCTGGAGAGCCTAATGGATGTGCGCCTGGCTTAC
GACCAGGACAGCTACATGGTCATCTTTCAGTTTCGGCCCAATAGCTTCCT
GCACGATTCCTCGCTGCTGCTCACGAAGCGCTACTTTCTGCAGCACTCGG
CGGACCCGGAGTATCCCTTTCTGTTCGAAGGGCCCGAAATAGTTCGTTGC
GAAGGCTGCCACATCCACTGGCGCGAT
MXO03161.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:34:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3708-PA | 1128 | CG3708-RA | 1..819 | 9..827 | 4095 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:01:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3708-RB | 1301 | CG3708-RB | 76..894 | 9..827 | 4095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:01:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 929205..930023 | 827..9 | 4095 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:01:03 has no hits.
MXO03161.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:34:31 Download gff for
MXO03161.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3708-PA | 1..819 | 9..827 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:56 Download gff for
MXO03161.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3708-RB | 71..894 | 1..827 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:56:53 Download gff for
MXO03161.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3708-RB | 71..894 | 1..827 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:56:53 Download gff for
MXO03161.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 929205..930028 | 1..827 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:56 Download gff for
MXO03161.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 823238..824061 | 1..827 | 99 | | Minus |
