MXO03163.5prime Sequence
162 bp (161 high quality bases) assembled on 2007-05-24
> MXO03163.5prime
CAGTCGACATGGCGAACGTGAAGATAGTGGAGTCCAAGCTGGACATATTC
CACGCACCGCAGACACATTCCTTGGCCCATGCCGTAGAGTCATCCTTTAC
GGCGGAACGGGGAACTCTCGCCTGGCAGTTTGCCCTGATCTACGGGGATG
TGGATGAACTAC
MXO03163.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:34:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33056-PA | 1032 | CG33056-RA | 1..154 | 9..162 | 770 | 100 | Plus |
CG33056-PB | 1032 | CG33056-RB | 1..154 | 9..162 | 770 | 100 | Plus |
CG33056-PC | 963 | CG33056-RC | 1..154 | 9..162 | 770 | 100 | Plus |
CG33056-PD | 1032 | CG33056-RD | 1..154 | 9..162 | 770 | 100 | Plus |
CG33056-PE | 1032 | CG33056-RE | 1..154 | 9..162 | 770 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:18:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG33056-RE | 1448 | CG33056-RE | 218..372 | 8..162 | 775 | 100 | Plus |
CG33056-RD | 1558 | CG33056-RD | 328..482 | 8..162 | 775 | 100 | Plus |
CG33056-RC | 1489 | CG33056-RC | 328..482 | 8..162 | 775 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:18:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 21200141..21200295 | 162..8 | 775 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:18:30 has no hits.
MXO03163.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:34:43 Download gff for
MXO03163.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33056-PE | 1..154 | 9..162 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:35:19 Download gff for
MXO03163.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33056-RC | 319..482 | 1..162 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:29 Download gff for
MXO03163.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG33056-RC | 319..482 | 1..162 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:29 Download gff for
MXO03163.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 21200141..21200302 | 1..162 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:35:19 Download gff for
MXO03163.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 21193241..21193402 | 1..162 | 98 | | Minus |