MXO03174.5prime Sequence
841 bp (776 high quality bases) assembled on 2007-05-24
> MXO03174.5prime
CAGTCGACATGCTGGAGCGCACTCAGGGATTAGTCCGGCTGCACGACGTG
GACAGCTCAGCGCTGCGGCAGCTGATCGATTACACCTACACCGGCGAGAT
CACGATCACCGAGCAGAACGTACAGGTGCTGCTGCCCGCGTCCGGACTGC
TGCAGATGCACTCGGTGCGGGATGCCTGCTGTAAGTTCTTGCTGCGCCAG
CTGCATCCTTCCAACTGCTTGGGCATACGCAGCTTCGCAGATGCCCACTC
CTGCAAGGAGCTGCACACGCGGTCGCATAAGTACGCCCTGCAGAACTTCC
AGCAGGTTGTGGGTACCGAGGAGTTCCTGCTGCTGCCGTTCGAGGAGGTT
CGCGAGCTGATCTCCAACAGCCAGCTGAACATCAGCTCCGAGGAGCGAGT
CTTTGCCGCCGTCATCAATTGGGTGAAACATGACCTGCCCACACGAAGAC
TCCACATTGCCGAGTTGATGTCAAACGTCAGACTGCCGCTGGTGAGCAGG
GATTTCCTCATGAGCTGCGTGGAAACGGAGACCCTCATGCGCGATGACTC
CGAGTGCAAGGAGCTGCTGCTGGAAGCCATGAAGTACCATTTGCTTCCGG
AGCAGCGCAGCATAATGGGCAGCCAGCGAACCCAGGAGCGTCGTCCGGAG
GGCATGAAACCCTACGTATTTGCGGTGGGAGGAGGCAGTCTCTTCGCCAT
TCACAACGAGTGCGAGGTGTACAATCCGCGCTCTAACTCTTGGAGTCCAG
TGGCACCAATGTTGTGGCGACGATCTCGATCCGGAGTAACATCCCTGCAC
AAGCAGTTGTATGTGGTCGGCGGCTACGATGGAGTCAGTGA
MXO03174.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:35:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15097-PB | 1854 | CG15097-RB | 309..1145 | 5..841 | 4185 | 100 | Plus |
| CG15097-PA | 1542 | CG15097-RA | 1..833 | 9..841 | 4165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15097-RA | 2792 | CG15097-RA | 471..1311 | 1..841 | 4190 | 99.9 | Plus |
| CG15097-RE | 3029 | CG15097-RE | 712..1548 | 5..841 | 4185 | 100 | Plus |
| CG15097-RD | 3029 | CG15097-RD | 712..1548 | 5..841 | 4185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18823732..18824572 | 841..1 | 4190 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:43:30 has no hits.
MXO03174.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:35:20 Download gff for
MXO03174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15097-PB | 306..1144 | 1..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:27 Download gff for
MXO03174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15097-RA | 471..1310 | 1..840 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:56 Download gff for
MXO03174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15097-RA | 471..1310 | 1..840 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:56 Download gff for
MXO03174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18823733..18824572 | 1..840 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:27 Download gff for
MXO03174.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14711238..14712077 | 1..840 | 99 | | Minus |
