MXO03195.5prime Sequence
678 bp (678 high quality bases) assembled on 2007-05-24
> MXO03195.5prime
CAGTCGACATGCGTCGCTCCTCGTTCACGCCCGTCTTCAACTTGAGCACC
CAGGAGCCGCTGATCGTGGTGGAGGAATCGCACACCGCCGAGGATGGTGA
TGACTTGGAGGGTGCCGCCGGTGGATGTGATCCCACTGCGGCCGGGACAC
GCCGTTCCAACAGCGATGACTCCGAACCGGACTCGCCGGTGAATCCCTAT
CTGCTTTGCCCATTTCCCGATATGCAACAGCGACGCAAGCATTCGCTGCC
ATCGCTTCAAATTACCGAGGGCATCACCGCCAGTCAGGTGCGTCGATTGT
CGGAGGTGGGCGGCGAGACTGGCGGGCTCAGTCCCAAGGAGGTCGAGTTT
CTGGCCACGCTCTCGCAGAAGGCCAATCCGACGGCCGGTGGACGTAGGCA
CTCGGTGGTCACCATATCGGCGGTGCCGCCAACGCTTTTCGGACGCAATC
GCCGCGAGTCCATTTCCGGTGTATCCTTCAGTGGCAGTCGCCGTGGCAGC
GTCATCGCCGGACCGCCATTAACCGATCACCGCGGCAGCGTGCACAACTT
GCAGCTGGACATCATGGATGGCATCGTCCAGCAGCGGAAGACGCGCAGCG
GAAGCGGCGTCTGGACAGCGCCCGTTCTGCAGGAGGCCGATAGCAATGTG
CCCGTGCAGACAGCAAGCTTTCTAGACC
MXO03195.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:37:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32700-PA | 657 | CG32700-RA | 1..654 | 9..662 | 3270 | 100 | Plus |
| CG32700-PB | 657 | CG32700-RB | 1..654 | 9..662 | 3270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32700-RB | 4208 | CG32700-RB | 442..1095 | 9..662 | 3270 | 100 | Plus |
| CG32700-RA | 1441 | CG32700-RA | 438..1091 | 9..662 | 3270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9510160..9510632 | 481..9 | 2365 | 100 | Minus |
| X | 23542271 | X | 9507082..9507265 | 662..479 | 920 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:05:52 has no hits.
MXO03195.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:37:13 Download gff for
MXO03195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32700-PB | 1..657 | 9..666 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:52:14 Download gff for
MXO03195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32700-RA | 430..1100 | 1..673 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:12 Download gff for
MXO03195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32700-RA | 430..1100 | 1..673 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:12 Download gff for
MXO03195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9507073..9507262 | 482..673 | 97 | <- | Minus |
| X | 9510160..9510640 | 1..481 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:52:14 Download gff for
MXO03195.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9401106..9401295 | 482..673 | 97 | <- | Minus |
| arm_X | 9404193..9404673 | 1..481 | 99 | | Minus |
