MXO03204.5prime Sequence
385 bp (154 high quality bases) assembled on 2007-08-28
> MXO03204.5prime
CAGTCGACTTGGTGTCCAGATAGAGGGCCCGGCGGATCTGCCCCAAGAGT
CCAAAGCATCTGAGAGTCAAGTTCCATCAAATGAAGGGACACTATGCNAC
ACCTCGCAATGTCGTCTAACCATTCAAGCACTTTGAGGCGGTGCACGAGT
TGATGCAGGGAGATGATGTCTCTGATCTGGATGAATATGCTCTATATAGT
GACAGCGATATGGAGGCCGACGAGGACCGGTCCGGCATGATCTCAAAAAC
CGAAGGGGACGATGCTTTGGATGCCTCAGGATCTTCATTTAACATCGTCG
CCCGCTGCAAGTGGGCAGAGGGCGAAGTGGACCTCCTTCCTAGACCTGAT
CCACACACTTGGACTGCGAGCATCTTTGCTGCAAA
MXO03204.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10494-RA | 1794 | CG10494-RA | 359..733 | 10..385 | 1424 | 92 | Plus |
| CG10494-RB | 2160 | CG10494-RB | 344..718 | 10..385 | 1424 | 92 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21518457..21518708 | 261..10 | 859 | 89.3 | Minus |
| 2R | 25286936 | 2R | 21518275..21518398 | 385..261 | 545 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:20:31 has no hits.
MXO03204.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:55:57 Download gff for
MXO03204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10494-RB | 344..715 | 10..382 | 91 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:40 Download gff for
MXO03204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10494-RB | 344..715 | 10..382 | 91 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:40 Download gff for
MXO03204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21518278..21518397 | 262..382 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:55:57 Download gff for
MXO03204.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17405783..17405902 | 262..382 | 97 | <- | Minus |
