MXO03217.5prime Sequence
774 bp (681 high quality bases) assembled on 2007-08-28
> MXO03217.5prime
CAGTCGACATGTTGGGTGTTCTACGTATCCAAGGAGCGTTGGCTTCGGCG
GGGCAGGCGCGTCTTCTGTCCGTCCGCCTGCTGGCCAGCAAATCCACCAC
TGACATGACCACAAACCGCGGTGAATCCACACAATCGACGTCCACCGAAC
ACTTTGATATAATCATCGGAGGCGGCGGACTGGTGGGCACCACATTGGCC
GCAGCTCTGGCCAAGAACTCGACGTTGGCGGACAAAAAGGTACTGCTGCT
GGAAGGTGCGCCCGAGTTCCGGGGATTTAATCCCACTGGGCCATACCAGA
ATCGCGTATCCGCCATCAATCACAACTCCATCGAGCTGTTCAAGTCCATT
GATGCGTGGAAGCACATCGAGTCGGCGCGCTACAAGCCCGTCAAGCAGAT
GCAGGTGTGGGAGTCCAACACGGACGCACTGATCCAGTTCCAGCACGATA
ACTTTGCCAGCGACGTGGCCTGCATCATTGAGAACGATTTGATCCTGGAT
GCGGTCTATGCGCTGGCCAAGGAATCACCCAATGTGGAGATCCTCAACAA
GGCCAGAATCCAGTGCGTTCGCCTGCCCAGGGACTCCAACTCCAATCACT
CCGAGCTGCAGCTAGAGGATGGACGCAACTTTTCCTGCAATTTGCTGATC
GGAGCGGATGGCGCCAATTCCGTGGTCAGAAAGGAGATGAACGTGTATGT
ATTTTCCCTGAACTACAACCGCATGGGCCTGGTGACTACACTGGAACTCG
GCGAAGATGCCTGTGATAATTCCG
MXO03217.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:16:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-PA | 1434 | CG7277-RA | 1..538 | 9..546 | 2615 | 99.4 | Plus |
| CG7277-PA | 1434 | CG7277-RA | 539..649 | 546..656 | 505 | 98.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7277-RA | 1604 | CG7277-RA | 77..842 | 9..774 | 3740 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5531382..5532147 | 774..9 | 3740 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:12:52 has no hits.
MXO03217.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:16:41 Download gff for
MXO03217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-PA | 1..649 | 9..656 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.3.fasta performed 2008-04-10 09:07:56 Download gff for
MXO03217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 49..814 | 9..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:00 Download gff for
MXO03217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 77..842 | 9..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:03 Download gff for
MXO03217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7277-RA | 77..842 | 9..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:03 Download gff for
MXO03217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5531382..5532147 | 9..774 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:00 Download gff for
MXO03217.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5531382..5532147 | 9..774 | 99 | | Minus |
