MXO03234.5prime Sequence
640 bp (638 high quality bases) assembled on 2007-08-28
> MXO03234.5prime
CAGTCGACATGTTTTCGCTGATTTTATTGGCCGTAACGCTATTGACTTTG
GCGTGGTTCTATCTGAAGCGCCACTATGAGTACTGGGAGCGACGCGGATT
TCCATTTGAAAAACACTCCGGGATTCCATTCGGTTGCTTGGACAGTGTGT
GGCGGCAGGAGAAGAGCATGGGCTTGGCCATCTACGATGTGTATGTGAAG
AGTAAAGAGCGCGTCTTGGGCATTTATTTGCTCTTCCGTCCGGCTGTTTT
GATCAGAGACGCCGATCTGGCTCGCCGTGTTCTGGCCCAGGATTTCGCCA
GTTTCCACGATCGCGGCGTTTACGTTGATGAGGAACGGGATCCCCTGTCG
GCCAATATCTTCTCGCTTCGCGGTCAGAGCTGGCGATCGATGAGGCACAT
GTTGTCGCCATGTTTCACATCCGGAAAGTTGAAGAGCATGTTCAGCACAT
CCGAGGATATTGGTGACAAGATGGTGGCCCATCTGCAAAAGGAGCTGCCG
GAGGAGGGCTTCAAGGAGGTGGACATAAAGAAAGTGATGCAAAACTATGC
CATTGACATTATAGCCTCGACTATCTTTGGCTTGGATGTAAATAGCTTCG
AAAATCCTGATAACAAGTTCCGTAAACTGGTGTCGTTGGC
MXO03234.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:17:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12800-PA | 1548 | Cyp6d4-RA | 1..632 | 9..640 | 3160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6d4-RA | 1872 | CG12800-RA | 72..709 | 4..640 | 3165 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22698396..22699027 | 9..640 | 3160 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:35:55 has no hits.
MXO03234.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:17:43 Download gff for
MXO03234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12800-PA | 1..632 | 9..640 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.3.fasta performed 2008-04-10 09:08:19 Download gff for
MXO03234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12800-RA | 64..703 | 1..640 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:43 Download gff for
MXO03234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6d4-RA | 70..709 | 1..640 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:08:44 Download gff for
MXO03234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6d4-RA | 70..709 | 1..640 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:08:44 Download gff for
MXO03234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22698388..22699027 | 1..640 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:43 Download gff for
MXO03234.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18524110..18524749 | 1..640 | 99 | | Plus |
