MXO03241.5prime Sequence
831 bp (779 high quality bases) assembled on 2007-08-28
> MXO03241.5prime
CAGTCGACATGAAAGCGATTAGTTTGGTATTCATCCTCGCCCCCTCGCTG
ATAGCGCTCTCCCATGGAAGCCCAGTTGATCGGGAGGCGATCGGAGGTCC
GATGGCGATGCGGGGATTCAACAACAGTCTGGGCACCTTCGTGGAGTACA
GCGGTCAGGCATCGCTAGCCTCCAGAGATTGGAAGTTATGTGCCAGCTTC
AACTTGGAGTCGCTTTATACGGCAATACGTGCGTTCAATGGTGTCTACAA
GGCTTTGGTCGATGTGTGCGATATCCAAAGGAATCTTTGTCCAGAAATTC
TGGACATTACCAAGTTTGCGGATAGTATTCTTCACGATGGACTAATTGAC
TTGGAGAAAGCGTTGGACTTTAGGGCCGGACGACTTTCTTTGGGAGATGA
CGACGTGTCCATCGAGCTTGGGATGGGAACATCCTGCATTGACAGCTCCA
TTAATGTTATAAATGTGATACTTCAAGAACCCTTTCACGAGGCTTATGAA
CCTGAAAACCTGATTATGATGAAGCCGTATCTATACCTTATGGGCAGCAG
ACTAAAAAGTGCCCAGAATGCCATAACTGAAGCCATAATCTCTGCCCACC
ACGGAAAGCTTAGTCCTCTTGTCCTTTCAATGAAACAGCTGCAAGCGAAG
ATGCCGCCAATTCTGGGAGATCTGGATGGCCGATATACAATCCGGAATAT
TTACCTTCTCGCCTCCGTAGTTCCTCGGCAGCGGGGCAACCACGTGGAGT
TCCAAATCACAGTGCCCTTGCTCGATGCGGAGAAGTTTAATATCTACCGA
TTGACGCCCATTCCACGGTTAAACATTGGCG
MXO03241.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:18:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4715-PA | 1596 | Iris-RA | 1..691 | 9..699 | 3405 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Iris-RA | 1767 | CG4715-RA | 26..848 | 9..831 | 4100 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1133251..1134073 | 831..9 | 4100 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:20:57 has no hits.
MXO03241.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:18:22 Download gff for
MXO03241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4715-PA | 1..690 | 9..698 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.3.fasta performed 2008-04-10 09:08:25 Download gff for
MXO03241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4715-RA | 40..870 | 2..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:19:34 Download gff for
MXO03241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-RA | 18..848 | 2..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:08:17 Download gff for
MXO03241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Iris-RA | 18..848 | 2..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:08:17 Download gff for
MXO03241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1133251..1134081 | 2..831 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:19:34 Download gff for
MXO03241.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1133251..1134081 | 2..831 | 99 | | Minus |
