MXO03267.5prime Sequence
772 bp (770 high quality bases) assembled on 2007-08-28
> MXO03267.5prime
CAGTCGACATGGCTTCTACGGAACGGAATTTTCTGCTACTGTCACTGGTG
GTCAGCGCATTATCCGGCTTGGTCCATCGATCAGACGCAGCGGAGATCAG
CTTTGGCAGTTGTACGCCCCAGCAGAGCGATGAGCGCGGCCAGTGCGTTC
ACATCACCAGCTGCCCCTACCTGGCCAACCTGCTGATGGTGGAGCCAAAG
ACTCCCGCCCAGCGAATCCTTCTCTCCAAGAGCCAGTGTGGCCTGGACAA
CAGGGTTGAGGGCTTGGTGAATCGAATCCTGGTCTGCTGTCCGCAGAGCA
TGCGGGGCAATATCATGGACTCGGAACCAACTCCTTCGACGAGGGATGCA
CTGCAGCAGGGGGATGTGCTGCCTGGAAATGACGTCTGCGGCTTCCTTTT
CGCTGATCGCATTTTCGGGGGCACCAATACGACCCTCTGGGAATTCCCAT
GGATGGTATTGCTGCAGTACAAAAAACTTTTTTCTGAAACCTACACTTTC
AACTGCGGCGGTGCATTGCTCAACTCGCGCTACGTCCTGACCGCTGGACA
CTGCCTGGCCAGCCGAGAACTGGACAAATCCGGTGCCGTTCTACACAGCG
TTCGCCTGGGGGAGTGGGACACTCGTACCGATCCTGACTGCACCACCCAG
ATGAACGGACAGCGCATCTGTGCACCGAAACACATCGACATTGAGGTCGA
GAAGGGCATCATCCACGAGATGTATGCTCCCAATTCCGTTGATCAGCGTA
ATGACATTGCGTTGGTGCGCCT
MXO03267.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:23:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SPE-RA | 1267 | CG16705-RA | 28..795 | 5..772 | 3825 | 99.9 | Plus |
| CG18754-RB | 1687 | CG18754-RB | 1432..1511 | 5..84 | 385 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:23:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23686709..23687104 | 82..477 | 1980 | 100 | Plus |
| 3R | 32079331 | 3R | 23687321..23687615 | 478..772 | 1475 | 100 | Plus |
| 3R | 32079331 | 3R | 23686282..23686361 | 5..84 | 385 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:23:07 has no hits.
MXO03267.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:48:28 Download gff for
MXO03267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SPE-RA | 25..795 | 1..772 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:04:19 Download gff for
MXO03267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SPE-RA | 25..795 | 1..772 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:04:19 Download gff for
MXO03267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23687321..23687615 | 478..772 | 100 | | Plus |
| 3R | 23686279..23686361 | 1..84 | 96 | -> | Plus |
| 3R | 23686712..23687104 | 85..477 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:48:28 Download gff for
MXO03267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19512001..19512083 | 1..84 | 96 | -> | Plus |
| arm_3R | 19512434..19512826 | 85..477 | 100 | -> | Plus |
| arm_3R | 19513043..19513337 | 478..772 | 100 | | Plus |
