MXO03280.5prime Sequence
842 bp (648 high quality bases) assembled on 2007-06-29
> MXO03280.5prime
CAGTCGACATGAATGAACTAGACAGTCTCAGGCAGGAAGCCGAGTCCCTA
AAGAACGCCATTCGGGATGCCCGGAAGGCGGCCTGCGACACATCACTGTT
GCAAGCGGCCACCTCGCTGGAACCCATCGGCCGCATACAGATGCGCACCC
GTCGTACATTACGCGGCCATTTGGCGAAAATCTACGCCATGCATTGGGGC
AACGATTCAAGGAATCTCGTATCAGCCTCACAGGACGGCAAACTGATCGT
TTGGGACTCGCATACCACGAACAAAGTCCATGCCATTCCACTGCGATCCT
CGTGGGTGATGACCTGTGCGTACGCCCCATCCGGTAGCTATGTGGCCTGC
GGTGGCCTCGACAACATGTGTTCAATTTACAACCTAAAGACGCGCGAGGG
CAACGTCCGGGTGTCCCGTGAGCTGCCCGGCCATGGTGGCTATCTATCGT
GCTGCCGCTTCCTGGACGACAATCAGATCGTGACCAGCTCCGGTGATATG
TCGTGCGGATTGTGGGATATCGAGACGGGACTGCAGGTAACCTCGTTTTT
GGGCCACACCGGCGATGTGATGGCCCTCTCACTGGCGCCCCAATGCAAAA
CGTTCGTATCCGGCGCCTGCGATGCGTCCGCCAAGCTATGGGACATCCGG
GAGGGTGTCTGCCAACAAACCTTCCCCGGCCACGAATCCGATATCAATGC
GGTCACATTTTTTCCGAATGGTCAGGCATTCGCCACCGGTTCGGACGACG
CAACCTGTCGATTGTTCGATATCCGTGCCGATCAGGAGTTGGCCATGTAT
TCGCACGACAACATCATATGCGGCATCACATCGGTGGCATTC
MXO03280.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:21:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10545-PB | 1023 | Gbeta13F-RB | 1..834 | 9..842 | 4095 | 99.6 | Plus |
| CG10545-PA | 1023 | Gbeta13F-RA | 1..834 | 9..842 | 4095 | 99.6 | Plus |
| CG10545-PC | 1023 | Gbeta13F-RC | 1..834 | 9..842 | 4095 | 99.6 | Plus |
| CG10545-PD | 1023 | Gbeta13F-RD | 1..834 | 9..842 | 4095 | 99.6 | Plus |
| CG10545-PE | 1023 | Gbeta13F-RE | 1..834 | 9..842 | 4095 | 99.6 | Plus |
| CG10545-PF | 1023 | Gbeta13F-RF | 1..834 | 9..842 | 4095 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:04:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gbeta13F-RH | 5178 | CG10545-RH | 868..1701 | 9..842 | 4125 | 99.6 | Plus |
| Gbeta13F-RG | 4765 | CG10545-RG | 455..1288 | 9..842 | 4125 | 99.6 | Plus |
| Gbeta13F-RF | 5080 | CG10545-RF | 770..1603 | 9..842 | 4125 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:04:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15861774..15862607 | 9..842 | 4125 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:04:09 has no hits.
MXO03280.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:21:37 Download gff for
MXO03280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10545-PF | 1..834 | 9..842 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:20:52 Download gff for
MXO03280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta13F-RE | 1005..1844 | 1..842 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:34 Download gff for
MXO03280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gbeta13F-RF | 764..1603 | 1..842 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:34 Download gff for
MXO03280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15861768..15862607 | 1..842 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:20:52 Download gff for
MXO03280.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15755801..15756640 | 1..842 | 99 | | Plus |
