MXO03281.5prime Sequence
631 bp (630 high quality bases) assembled on 2007-08-28
> MXO03281.5prime
CAGTCGACATGAGCGAGGAATTCAAGCTGCCCAAGCGTTCCCGCAAGCGC
ACACGTGAGGTGAAGCGCAAGGCTCGTCCGGAGCTGGACGGCGAGAATGC
CTGGTCGGCCATGCGGTACTGTGAGAAGTTCGAGCCATTTTGGGATTTCA
CCGATAACCTGGAGCGGATCGAGGAGTCGCAGGTGCCGGAGTCGGAGTTC
ATCGAACGCTTCGAGCGACCCTACAAGCCGGTGGTCATTCGCGGCTGCAC
CGATGGCTGGTTGGCGCTGGAAAAGTGGACACTAGCCCGCCTGGCCAAGA
AGTATCGCAACCAGAAGTTCAAGTGCGGCGAGGACAACGAGGGCTATAGC
GTCAAGATGAAGATGAAGTACTACGTGGAGTACATGCAGAGCACGCGCGA
TGACAGCCCGCTGTACATCTTCGACAGCAGCTTCGGCGAACACCATCGTC
GGCGCAAGCTCCTGGATGACTATGTGGTGCCCAAGTATTTTCGCGACGAC
CTCTTCCAGTACTGCGGCGAGAATCGTCGTCCGCCTTACCGCTGGTTTGT
CATGGGACCGGCTCGCTCCGGCACCGGCATCCACATTGATCCACTGGGCA
CTAGTGCCTGGAACACGCTGATCCGCGGCCA
MXO03281.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:21:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5383-PA | 1227 | PSR-RA | 1..623 | 9..631 | 3115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PSR-RB | 1590 | CG5383-RB | 77..699 | 9..631 | 3115 | 100 | Plus |
| PSR-RA | 1590 | CG5383-RA | 77..699 | 9..631 | 3115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22361673..22362295 | 631..9 | 3115 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:51:52 has no hits.
MXO03281.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:21:43 Download gff for
MXO03281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5383-PA | 1..622 | 9..630 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.3.fasta performed 2008-04-10 09:09:01 Download gff for
MXO03281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5383-RA | 232..860 | 1..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:57:24 Download gff for
MXO03281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PSR-RA | 70..698 | 1..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:21:17 Download gff for
MXO03281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PSR-RA | 70..698 | 1..630 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:21:17 Download gff for
MXO03281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22361674..22362299 | 1..630 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:57:24 Download gff for
MXO03281.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18187396..18188021 | 1..630 | 99 | | Minus |
