MXO03302.5prime Sequence
632 bp (614 high quality bases) assembled on 2007-06-15
> MXO03302.5prime
CAGTCGACATGTCGCTTCTGGAGCAATACGAACAGCAATACGCCACGTTA
ATAGCAGAAATAACGGCCCATATTGGACGGCTGCAGCAGCAAAACAACAA
CAGCGAGCGCCATGATTTGTGCAGCAAGATCGACTCCAGTTTGCCCGAGG
CTCAGGAATTGCTGGAGCAGATGGGTCTGGAGGTGAGGGAGCTAAATCCT
GGACTGCGGAGCAGCTTCAACGGAAAGCTGCAGGTGGCCCAGGCAGAACT
GAAACGGCTGCAGGCGGAGTACAGGTTGACCAAGGACAAACAGCGCTCCC
AAGCCAACACATTCACCACTCTGGACTTGGGTGACAGCTATGAGGATGTG
TCCATAAGTACAGATCAACGCCAACGCCTCTTGGACAACTCGGATAGGAT
TGAACGGACGGGCAACAGGTTAACCGAAGGGTACAGAGTGGCCTTGGAGA
CGGAGCAACTGGGCGCCCAGGTCCTAAATGATCTGCACCACCAAAGGGAA
ACTCTACAGGGAGCCAGGGCTCGACTTCGAGAAACCAATGCCGAGCTGGG
AAGAGCTTCTCGCACTCTGAATACCATGATGTTAAGAGCCCTGCGGGAGA
AGGTGGTCTTGTATGGAGTGGGTGTCTGCTTT
MXO03302.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:23:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3279-PA | 693 | CG3279-RA | 1..624 | 9..632 | 3095 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:56:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vti1-RA | 1370 | CG3279-RA | 142..765 | 9..632 | 3105 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:56:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 692091..692620 | 632..103 | 2635 | 99.8 | Minus |
| 3L | 28110227 | 3L | 692670..692778 | 117..9 | 485 | 96.3 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:56:01 has no hits.
MXO03302.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:23:02 Download gff for
MXO03302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3279-PA | 1..624 | 9..632 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:38:50 Download gff for
MXO03302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vti1-RA | 137..765 | 1..632 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:53:59 Download gff for
MXO03302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vti1-RA | 137..765 | 1..632 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:53:59 Download gff for
MXO03302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 692091..692620 | 103..632 | 99 | <- | Minus |
| 3L | 692685..692783 | 1..102 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:38:50 Download gff for
MXO03302.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 692091..692620 | 103..632 | 99 | <- | Minus |
| arm_3L | 692685..692783 | 1..102 | 96 | | Minus |
