MXO03303.5prime Sequence
616 bp (602 high quality bases) assembled on 2007-06-15
> MXO03303.5prime
CAGTCGACATGGCTTCGATTGTGGAGAAAGTGCGTCGCATTTTGGACTCA
AAAGATCTGGGCGACATCACAACGGAACTGTGTGACTTTTCTCTTAAGGA
ACAGAATGCCACCGCCGAGGCCCAGGGAGTACAGCCCTCATCCGCATCCG
ATTTTGTGCCCATTCTTGGACAGACAGTCACCTATATTGTGGCCTGTGTG
TTGATCAATGAGCACGACGAGCTTCTGATGATCGAGGAGGCCAAACAGAG
CTGTGCCGGCAAGTGGTACTTACCCGCTGGTCGCATGGAAAGGGGCGAAT
CCATCACGGAGGCAGCCGCCCGGGAAGTTTTCGAAGAGACTGGTCTAAAT
GCCGAGCTGACCACTCTATTAGCGGTGGAGGCCGCCGGTGGCTCTTGGTT
CCGCTTCGTGCTCACTGGACGCATCACAGGCGGCCGACTTAAAACTCCTG
CGGATGCAGACGCCGAATCGATTCAGGCGAGATGGGTGCGTAATCCCAAG
GAAGTACCTCTCCGAGCCAACGACATACTCAGTATCATTGAGATTGGAAG
GGCGTATCATCAGGGGCAAAAGATTGCCATTAGCCCTTCACCCTGGCATG
GGACCATACTGCCCAC
MXO03303.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:23:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10898-PA | 1023 | CG10898-RA | 1..608 | 9..616 | 3040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:08:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10898-RA | 1969 | CG10898-RA | 599..1206 | 9..616 | 3040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:08:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11558756..11559114 | 258..616 | 1795 | 100 | Plus |
| 3R | 32079331 | 3R | 11558435..11558685 | 9..259 | 1255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:08:58 has no hits.
MXO03303.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:23:10 Download gff for
MXO03303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10898-PA | 1..608 | 9..616 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:34 Download gff for
MXO03303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10898-RA | 642..1253 | 1..616 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:01:20 Download gff for
MXO03303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10898-RA | 595..1206 | 1..616 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:01:20 Download gff for
MXO03303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11558431..11558684 | 1..258 | 98 | -> | Plus |
| 3R | 11558757..11559114 | 259..616 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:34 Download gff for
MXO03303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7384153..7384406 | 1..258 | 98 | -> | Plus |
| arm_3R | 7384479..7384836 | 259..616 | 100 | | Plus |
