Clone MXO03323 Report

Search the DGRC for MXO03323

Clone and Library Details

Library:MXO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus TAP tag for tissue culture
Original Plate Number:33
Well:23
Vector:pMK33-CTAP-BD
Associated Gene/TranscriptCG4164-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

MXO03323.5prime Sequence

257 bp (248 high quality bases) assembled on 2007-06-15

> MXO03323.5prime
CAGTCGACATGCAGCTTATCAAGTGCTTGGTTATAATTCAGCTGTCCCTC
TTGCTGGTGGAGGAGTCATTTGCCGGCCGGGACTTCTACAAAATACTGAA
CGTAAAGAAAAACGCCAACACGAACGAAGTGAAGAAGGCGTATCGCCGTT
TGGCCAAGGAGCTGCATCCGGATAAGAACAAGGACGACCCGGATGCCTCC
ACAAAGTTCCAGGACCTGGGAGCGGCCTACGAAGTCCTCTCCAATCCGGA
CAAACGG

MXO03323.5prime Blast Records

Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:24:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG4164-PA 1065 CG4164-RA 1..249 9..257 1245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:09:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG4164-RA 1488 CG4164-RA 151..403 5..257 1250 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:09:30
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 453258..453510 5..257 1250 99.6 Plus
Blast to na_te.dros performed on 2014-11-28 19:09:31 has no hits.

MXO03323.5prime Sim4 Records

Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:24:48 Download gff for MXO03323.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4164-PA 1..249 9..257 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:24 Download gff for MXO03323.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4164-RA 147..403 1..257 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:29 Download gff for MXO03323.5prime
Subject Subject Range Query Range Percent Splice Strand
CG4164-RA 147..403 1..257 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:29 Download gff for MXO03323.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 453254..453510 1..257 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:24 Download gff for MXO03323.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 453254..453510 1..257 98   Plus