MXO03325.5prime Sequence
637 bp (602 high quality bases) assembled on 2007-06-15
> MXO03325.5prime
CAGTCGACATGCCGCCGGAAATGGAGATCATAGTGGGCACCTACGAGGAG
GTCCTGCTGGGCTTCAAGCTCATCAAATCGCCGACTGACGGCTTGACCGA
TTCCGTCAAATTTGAGCTGAAACAGACTTTTGCAGACAGCTCCCATGCAG
GATCCATTACATCGGTGGCCGTGCAGTGGCCTTGGGTGGCCAGTGGCGGT
ACCGACGACAGGATCTTCGTCTACGACATGCGCACGCGGAAACAGTCGCA
GATCATACTCTCGCACGCCGGAAGAGTGAACACACTGAAATTCACACCTG
ACCTGTCGCACTTGCTCTCCGGGAGCGACGATGGCCATATGATCGCCACA
CGCGTGGGCAGCTGGACCAAAGAGGGTGATTGGCAGAAGGCCCATGCCGG
ACAGGCCGTCACCCACATCAGTTGCCATCCCAGCAGCAAGTTGGCCTTAT
CTTTGGGCGGCGACCAGGTGCTGAACACCTGGAATCTGGTCAATGGCCGC
GTCGCCTACAAGACCAATTTAAAGAACAAGGCTACGCTGGGTCTCCAACC
GGGCTGCTTGTCGTGGTCCAAGCAGGGCGATCACTTCACACTTAGCGGTC
CATTGGTTCTGGAGATCTGGGGCATCCAAAACGCTCA
MXO03325.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:24:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12608-PA | 1332 | CG12608-RA | 1..629 | 9..637 | 3095 | 99.6 | Plus |
| CG9123-PA | 1305 | CG9123-RA | 1..618 | 9..626 | 2465 | 95.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12608-RA | 1616 | CG12608-RA | 134..763 | 8..637 | 3120 | 99.7 | Plus |
| CG9123-RA | 1592 | CG9123-RA | 137..763 | 8..634 | 2730 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15343863..15344492 | 637..8 | 3120 | 99.7 | Minus |
| X | 23542271 | X | 15341355..15341981 | 634..8 | 2730 | 95.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:32:50 has no hits.
MXO03325.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:24:55 Download gff for
MXO03325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12608-PA | 1..628 | 9..636 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:19 Download gff for
MXO03325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12608-RA | 127..762 | 1..636 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:16 Download gff for
MXO03325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12608-RA | 127..762 | 1..636 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:16 Download gff for
MXO03325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15343864..15344496 | 1..636 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:19 Download gff for
MXO03325.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15237897..15238529 | 1..636 | 99 | | Minus |
