MXO03332.5prime Sequence
638 bp (609 high quality bases) assembled on 2007-06-15
> MXO03332.5prime
CAGTCGACATGCACGGACGCGTAAAAGTGAGGACCACGGAGGAGGAGCGC
GAGCGGAAGAAGAAGGAGCAGGCTCTGAAAGTCCGGGCCTACCGTGCAGC
CATGGGAAGGATTCAGAAGAAGAGGGAGGCGGGTGAGCTGGACAACGAAA
TGCTCAGCCTGACAGTTCAGATCTTGCTGCGGAATCCGGATGTCAGCATG
CTGTGGAACATCCGCAGGGAGTGCGTGCTGGAGAAGCTGTTCAGGCTAAA
GGAAGAGGAGGCCACGTGCGAGACGCCCAGCGAGGAGAAGCCAGAGAAGG
AAAACCAAACCGGTGAGAATAAGCCGAGTGAAAAGAAGGCCGCTGGCGAG
GACAAGGCCCATTCCATTTTCACCTGCGAACTGGACCTCACCGAGCAGTG
CCTAATGGTCAACCCGAAGTCCTACAACGCCTGGCACCACCGCTGCTGGA
CCCTGGAACAGAATCCCAGGGCGGACTGGCAGCAGGAGGTGAAACTGTGC
AACAAGTACCTCAAATTCGACGAGCGCAACTTCCACACCTGGGACTACAG
GCGCTATGTGACCGGCAAGGCCATGGTGCCGGCCACCCAGGAGCTGGACT
TCTGCACCGAGAAGATCAAGGCTAACTTCTCCAACTAC
MXO03332.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:25:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12007-PA | 1548 | CG12007-RA | 1..630 | 9..638 | 3125 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:56:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12007-RA | 1853 | CG12007-RA | 82..711 | 9..638 | 3135 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:56:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5128168..5128797 | 9..638 | 3135 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-28 21:56:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| accord2 | 7650 | accord2 QBERT 7650bp | 6408..6459 | 533..482 | 107 | 67.3 | Minus |
MXO03332.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:25:43 Download gff for
MXO03332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12007-PA | 1..630 | 9..638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:01 Download gff for
MXO03332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12007-RA | 75..711 | 1..638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:08 Download gff for
MXO03332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12007-RA | 75..711 | 1..638 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:08 Download gff for
MXO03332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5128161..5128797 | 1..638 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:01 Download gff for
MXO03332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 953883..954519 | 1..638 | 99 | | Plus |
