MXO03337.5prime Sequence
512 bp (445 high quality bases) assembled on 2007-06-15
> MXO03337.5prime
CAGTCGACATGGGAGCAAAGGCAACAAAAATGGAAGGTGAATATCTGCCG
GATACGCCGACACTAAACAAAATGCGCCTGGCCAGCGAAAAGCGAGAACA
AATGGAAATGACGACGCCGAATCGAGAGCAAAACAACGCTTTGCTCGATC
CTCGATCACCAAATGGCTGCCGCACGCCTTTAACCTTCTTGCAGGCGTCA
AAACCTCGCGTTGAGGAGGAGGAGCAGCATGTGACCACCAGTGAAAATGC
CTTCTCCATGCTGCGAAAACGTTTGCTCAAGGGCTTCTCCCTGAACGATC
CTCGCTCTCCTCAGCTGAATCGCACTCCACTGGTCCTCGATGAGGTTCGT
TCGCTTAATATGGATGACACATTCGCCGATCTCTTCGTGGACACCAGGGT
GGGTACAGCACAGAGAGCAGTGCCTGCATCACCGCCCCAAGTGGATTTAG
AGGAGAGCTGCGATAGCTTCGGCACACCGCCGTCTGCTGCACACAACAAT
ATTTCCCTGGAG
MXO03337.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:26:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10364-PA | 1146 | msb1l-RA | 1..504 | 9..512 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:03:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| msb1l-RA | 1366 | CG10364-RA | 98..601 | 9..512 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:03:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19578040..19578366 | 186..512 | 1635 | 100 | Plus |
| 2L | 23513712 | 2L | 19577798..19577974 | 9..185 | 885 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:03:42 has no hits.
MXO03337.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:26:10 Download gff for
MXO03337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10364-PA | 1..504 | 9..512 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:43 Download gff for
MXO03337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msb1l-RA | 98..601 | 9..512 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:40:08 Download gff for
MXO03337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| msb1l-RA | 98..601 | 9..512 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:40:08 Download gff for
MXO03337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19577798..19577974 | 9..185 | 100 | -> | Plus |
| 2L | 19578040..19578366 | 186..512 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:43 Download gff for
MXO03337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19577798..19577974 | 9..185 | 100 | -> | Plus |
| arm_2L | 19578040..19578366 | 186..512 | 100 | | Plus |
