MXO03341.5prime Sequence
616 bp (597 high quality bases) assembled on 2007-06-15
> MXO03341.5prime
CAGTCGACATGATGGATGAGCAGCTAATTGACGAGGTAGCGCAGCACGGA
GTGATCTACAACCGGCAGAAGTACTACCTCAACGGCGGCGCCAATGGTGG
CAAGTACGAGACGAAGGACGAGGCCTGGCAGCTGATTGCGATGAAGCTGC
GCACGGATGTGGACACGTGCAAGAAGCGGTGGAAGTACCTACGCGAACGC
TACGTGTCGCAGCGGAAGCAGGGCGATCCACCTGTCTACGAACACCTGTC
GCGTCCATACCTGGAGAAAATGAAGTTCTTGGACCAGCACATCCAGCCGC
GCAAGTCCTACCGCCATGTGCCGAACTTCCTAACATCTCCACAGTCCGCC
AACAGCTCCGGCTACAACGAATACCAGGTTGATAAGTCCAATGGCTCCAT
GAAGAATGTGTCTCAGTTTGGCAGCTCAGGGCAAAGTCATCTTTACCACC
AGCCGGATCAGCAACACGCAATGAGTGCTCTGAGTAACGTTGCTGCATCT
GCGCTGGAAAACGTCAATGGCCAGGTGAAGATCGAGGCGGACCAGGTGTT
CAGGGATTTTGCGGCTGCCGTGGCCTCACAGCAGCTCCAGCACATATCAC
AGTCACAAATGCAGCA
MXO03341.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:26:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-PA | 1521 | CG7745-RA | 1..608 | 9..616 | 3040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:56:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7745-RA | 1893 | CG7745-RA | 69..676 | 9..616 | 3040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:56:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11308155..11308612 | 159..616 | 2290 | 100 | Plus |
| 2R | 25286936 | 2R | 11307947..11308097 | 9..159 | 755 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:56:27 has no hits.
MXO03341.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:26:37 Download gff for
MXO03341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-PA | 1..607 | 9..615 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:39:06 Download gff for
MXO03341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..675 | 9..615 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:54:11 Download gff for
MXO03341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7745-RA | 69..675 | 9..615 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:54:11 Download gff for
MXO03341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11307947..11308097 | 9..159 | 100 | -> | Plus |
| 2R | 11308156..11308611 | 160..615 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:39:06 Download gff for
MXO03341.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7195452..7195602 | 9..159 | 100 | -> | Plus |
| arm_2R | 7195661..7196116 | 160..615 | 100 | | Plus |
