MXO03345.5prime Sequence
610 bp (599 high quality bases) assembled on 2007-06-15
> MXO03345.5prime
CAGTCGACATGGCAGAGGGAGTGGAGAGCATCAAGCTGGAGGCGCTGTCG
CTGAGCGAGGGAATCCGGGAGTCGCCCGTGTGCATACTGGTGCTGGGAAT
GGCCGGCAGCGGGAAGACCACGTTCACACAGAAGCTCATCCAGCACGCCC
AGGAGAAGTTCAATCCGTACGTGGTCAACCTGGATCCGGCGTGCAGGGAA
GTACCGTACGCGGCGCACGTGGACATACGGGACACGGTCAACTACCGGGA
GGTGATGAAGCAGTACCAACTGGGTCCCAACGGTGGCATTGTGACCGCGC
TCAATATGTTCACCACCAAAATGGCACAGTTTGCGGAGCTAGTGCGTCGC
GCTGGCGAGCGCGGACACAAGTGGTGTGTGATCGACACGCCCGGACAGAT
CGAGGTGTTTAACTGGTCGGCTTCCGGGAGCATCATAACCGAGGGACTGG
CCACCATGTTTCCCACCATTGTGGTCTATGTAATGGATGTGGAGCGCAGT
GCTTGCCCTACCACCTTCATGTCCAACATGCTGTACGCCTGCTCCATCCT
GTACAAGACCCGTTTGCCCTTCCTTGTGGCGCTGAACAAGATCGACCTAA
AGGACTGCGG
MXO03345.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:26:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3704-PA | 1149 | CG3704-RA | 1..602 | 9..610 | 3010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:48:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3704-RA | 1515 | CG3704-RA | 73..674 | 9..610 | 3010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:48:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 940152..940733 | 590..9 | 2910 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:48:24 has no hits.
MXO03345.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:26:59 Download gff for
MXO03345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3704-PA | 1..602 | 9..610 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:48 Download gff for
MXO03345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3704-RA | 66..674 | 1..610 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:33:33 Download gff for
MXO03345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3704-RA | 66..674 | 1..610 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:33:33 Download gff for
MXO03345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 940067..940086 | 591..610 | 100 | <- | Minus |
| X | 940152..940739 | 1..590 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:48 Download gff for
MXO03345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 834100..834119 | 591..610 | 100 | <- | Minus |
| arm_X | 834185..834772 | 1..590 | 99 | | Minus |
