MXO03351.5prime Sequence
594 bp (591 high quality bases) assembled on 2007-06-15
> MXO03351.5prime
CAGTCGACATGATATTATTCAAAGGAATTCGGCGGGTGCAATCCCAGCTA
AGAACGCCGGTTGATTTGGTGCTCATTCGGTACTCCACTGCAGCAACGAT
AGCTTCCCAAGATGACAAAGGTGTCACTACAGCGTCGCCAGTATCCCAGG
CGGGAAAGGTCCAGCATTTACCCGATAGTCAAATTACCTGGATGCCTAGT
CCGTACACCATGCCCGGAAAAACTCTTAGCCAGTACAAGAAGCTATCCAA
GTTCCGGCTGACATCGCTGGTGGTCATTACAACGATGGGCGGCTATGCCA
TGGCGCCAGCTGCTTTCGATCCCACAACGTTTGCGATGTGCACCCTGGGC
ACAGGACTCGTTTCGGCTGCGGCGAATGCCATTAATCATTATCTCGAACT
TCCTTTCGATTCGCAGATGTCGAGGACAAAGAACCGGGTGCTCGTCACGG
GGCAAATGACACCACTGCATGCAGTTACCTTCGCCGCGGTGTCGGCAACT
GCCGGCTTAAGTATGCTGTATTTCGGAGTAAATGGATTGACGGCGGCGCT
GGGAGCGGGTAACCTGTTCCTCTACACCACGATATACACACCGA
MXO03351.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:27:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5037-PA | 1176 | CG5037-RA | 1..586 | 9..594 | 2855 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5037-RA | 1473 | CG5037-RA | 140..725 | 9..594 | 2885 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10331988..10332317 | 265..594 | 1605 | 99.1 | Plus |
2L | 23513712 | 2L | 10331742..10331930 | 76..264 | 930 | 99.5 | Plus |
2L | 23513712 | 2L | 10331610..10331681 | 9..80 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:51 has no hits.
MXO03351.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:27:25 Download gff for
MXO03351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5037-PA | 1..585 | 9..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:23 Download gff for
MXO03351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5037-RA | 140..724 | 9..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:38 Download gff for
MXO03351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5037-RA | 140..724 | 9..593 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:38 Download gff for
MXO03351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10331610..10331681 | 9..80 | 100 | -> | Plus |
2L | 10331747..10331930 | 81..264 | 100 | -> | Plus |
2L | 10331988..10332316 | 265..593 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:23 Download gff for
MXO03351.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10331988..10332316 | 265..593 | 99 | | Plus |
arm_2L | 10331610..10331681 | 9..80 | 100 | -> | Plus |
arm_2L | 10331747..10331930 | 81..264 | 100 | -> | Plus |