MXO03358.5prime Sequence
631 bp (391 high quality bases) assembled on 2007-06-15
> MXO03358.5prime
CAATCGACATGGAAGGCGACGCGGAAAATCGCAAGGATCAAATCCTCGAG
CGTTTGAACAAAAGAAACAAGGACAGGCAAAACTATTTGGATGTGAAATC
GGAGCTGCGTTCCAAGGAAACAGTGCAGAACGAGGGCGTTGACTACTTCT
ACCAGACTTTCAGCCAAAAAACCATGGATATAGAGCAGCGATTAAAGGAT
GTGCAGTGCGGCGATGGCCAGCCAACCGATTTGGCCAGAAACTTCGCCGA
CATAACTGTGGAGATCCAGGATCTGCATCGATATCTCACCGCATCCACCA
TGTTTCTGCCCGACTTCAAGATCAAATCCTGTCAAAATATCCTTAACACC
CTGACCGCCGTCAGTGATGAAACCCGCCAGCGCCTGTTGCCCAATAAAAA
GTTTGGTTTCAGTGGCAAAAAGACCGTCACAAAACCAAAAGTCCCTCCAA
ATAAGGATATAGTCAACGCGAAACTCAGTAAAGTCCCAGAAAAACTAGGC
TCCAATTTCACGTGGACGATTGCCAATCGAACGAACGAGCATATAGTCCT
GGATTCCGCTAAAGTCAATGGCCAGGACATCACAATATCGAAACTGAACC
ACTGTTTGGTTGAACTGCAAGGTCCTTCCCG
MXO03358.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:27:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31961-PA | 1068 | CG31961-RA | 1..611 | 9..619 | 2930 | 99.1 | Plus |
| CG31961-PB | 1068 | CG31961-RB | 1..611 | 9..619 | 2930 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31961-RB | 1477 | CG31961-RB | 243..859 | 8..624 | 2995 | 99 | Plus |
| CG31961-RA | 1333 | CG31961-RA | 99..715 | 8..624 | 2995 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4186868..4187484 | 624..8 | 2995 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:22:41 has no hits.
MXO03358.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:27:54 Download gff for
MXO03358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31961-PB | 1..622 | 9..631 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:20:47 Download gff for
MXO03358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31961-RA | 95..721 | 1..631 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:09:53 Download gff for
MXO03358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31961-RA | 95..721 | 1..631 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:09:53 Download gff for
MXO03358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4186862..4187487 | 1..631 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:20:47 Download gff for
MXO03358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4186862..4187487 | 1..631 | 98 | | Minus |
