MXO03361.5prime Sequence
608 bp (606 high quality bases) assembled on 2007-06-15
> MXO03361.5prime
CAGTCGACATGAGCACGGGCATTGGCAGCAGCAGCAGCAGCACGGAGGAG
CAGCAGCACCTGGAACTGAGCGCGGACTTGGAGGCGTGCTCCCTGCTTGG
CCCGCAGGACCCGTCGAACGTCGATACCGGCAGGACACGCGCTAAGCAGC
GACTCAGCTTGAACGGAAAGCGGCGCCGCAGCCGGATGTCGCGCAGGGCC
AATCTGATCGGCATCTGCGGCGTGAGCAGCCTGTGCATCCTGCTGCTGAT
CGCCACCACCCAGCACCGTCCGCTGACCACGCCGTTTAATCAGTCGGCTG
GGCGGGATCAGGGCGCGTCCGTAGATGGCGGTCCATCCAATTCGCTGGCG
CGCAGCGCCTTCTACGATCGCTTCCAGCAGCAATTGCAGCAGCAGCAGCA
GTCGTCGCAGACGGCCGTCTACAATCTGACAGCTACTATAGTGGATGTCC
TGTCGGCTCAACGGTCGCGCATCCTGGCCGAAATGGAGAACTTCGAGTAT
CCGCGCGGCGGCGCCGAGCGTCTGACGGACATGACGCCGGAGACGAACGG
CACCCCGGTGCGCAGTGTGGTGGTCACCTCATGGCGCTCCGGCTCCACCT
TCCTGGGT
MXO03361.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:27:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31637-PA | 1461 | CG31637-RA | 1..600 | 9..608 | 3000 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31637-RB | 2595 | CG31637-RB | 230..829 | 9..608 | 3000 | 100 | Plus |
| CG31637-RA | 2672 | CG31637-RA | 230..829 | 9..608 | 3000 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6498876..6499475 | 9..608 | 3000 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:56 has no hits.
MXO03361.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:28:01 Download gff for
MXO03361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31637-PA | 1..600 | 9..608 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:26 Download gff for
MXO03361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31637-RA | 223..829 | 1..608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:55:41 Download gff for
MXO03361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31637-RA | 223..829 | 1..608 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:55:41 Download gff for
MXO03361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6498869..6499475 | 1..608 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:26 Download gff for
MXO03361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6498869..6499475 | 1..608 | 99 | | Plus |
