MXO03362.5prime Sequence
599 bp (594 high quality bases) assembled on 2007-06-15
> MXO03362.5prime
CAGTCGACATGGCGAGCGGGACAAGCGGCACAAGCAGCAGTGAAACGGCC
CAGTCGACGGACATGGCACCATCATCGGCCGAGAAGTGGGGCTTCCCTTT
GATTGAGCTCTACCGCCTGGCATTCACGTTCTACAAGCGGAACTCCGGCA
AGGCCATCCACTTGTCGTACGAGGACAACCTCAAGCTGATCGCCTTCAAG
CAGCAGGCGGCGCTGGGCCCCTTCAACACGAGTCGCGCCCCGGCGCTGGG
CGTCCTGGACGTGATCGGACGCGACCGGCAGCAGCACTGGCAGCTGCTCG
GTGAGATAACGCGCGAGCAGGCGATGGAGGGGTTCGTCGACCTGCTGGAC
ACAATGTGCAGCGCCTTTCGGCCGTACATTGAGGCCGTGCGGCAGGACCG
CGACGAGACGCTGCGCAAGGAGCTGCGCCTCATGGAGGAGAAGAAGGAGG
CACGCGAGCGGCAGGAGAACGCCCAGCAGGAGCTGCTCGAGGAGGGTTAC
AAGGAGGAGCTGCAGCGCCGCCAGCTGCAGGACGCACTCAACAAGCAGAC
TTACCAGCAGTTTAAGCTGTACGCTGAGAAGCAGTTCCCCGGAAACCCC
MXO03362.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:28:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14232-PA | 1443 | CG14232-RA | 1..591 | 9..599 | 2955 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14232-RB | 1874 | CG14232-RB | 165..756 | 8..599 | 2960 | 100 | Plus |
| CG14232-RA | 1905 | CG14232-RA | 135..726 | 8..599 | 2960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19703403..19703830 | 566..139 | 2140 | 100 | Minus |
| X | 23542271 | X | 19703888..19704019 | 139..8 | 660 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:09:50 has no hits.
MXO03362.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:28:10 Download gff for
MXO03362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14232-PA | 1..591 | 9..599 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:35 Download gff for
MXO03362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14232-RA | 129..726 | 1..599 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:04 Download gff for
MXO03362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14232-RA | 129..726 | 1..599 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:04 Download gff for
MXO03362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19703165..19703197 | 567..599 | 100 | <- | Minus |
| X | 19703403..19703830 | 139..566 | 100 | <- | Minus |
| X | 19703889..19704022 | 1..138 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:35 Download gff for
MXO03362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19597198..19597230 | 567..599 | 100 | <- | Minus |
| arm_X | 19597436..19597863 | 139..566 | 100 | <- | Minus |
| arm_X | 19597922..19598055 | 1..138 | 97 | | Minus |
