MXO03364.5prime Sequence
622 bp (586 high quality bases) assembled on 2007-06-15
> MXO03364.5prime
CAGTCGACATGGAAGAATACGAAGCACAATTGCTCGTTGTGGAGCAGGCA
TTGGAAAATGCCGCGGATGATGCGCAACGCCAGGATCTTTTGGCCCTAAA
GAACAATCTGCAGGAGCTGTTGGCCCTCACCCGGGAATCAGGAGATGAAG
CACCAATCGATGAACTACCTCAGCAGGGCGACAATCTGGATGATGAGCTG
CAGCGGCTCAAAAGCGAACTTAATGACCTAGAGGCGGCCGGCTCCTCACA
AACCGCGTTGGATGAAGAACGCCAGCTGGCTGACTTGCGAACCAAGTACA
CCGCCATGGTGGGCGAGAAGTGCTCCGCACCACACGAGCACAGTTGGGGC
ACCTGCTACCACAATGCCCTCATCTGCGGAGTGGACGACGAGGTGGTTAT
GAACAGCGAAGGCGTCTTGGATGCTCGACTAAGGGTTCTCTTTACGAATC
CCACGCATCGAGAAATGCTGCCCTGTTCGTATTACCTCGAAGGCGAGTGC
CGCTTTGATGAGGCCAAGTGTCGCTTTTCCCATGGCGCCCTTGTCACCGG
TAGCTCCATTAGAAAATATAATCCACCCGATTTCCACAAAACTCTCCCCG
CAGTCGTCCAGTTTTTTGCCCC
MXO03364.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:28:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4709-PA | 1542 | CG4709-RA | 1..582 | 9..590 | 2910 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4709-RB | 1731 | CG4709-RB | 190..795 | 9..616 | 2990 | 99.7 | Plus |
| CG4709-RA | 1602 | CG4709-RA | 61..666 | 9..616 | 2990 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9954592..9955180 | 26..616 | 2840 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:10:09 has no hits.
MXO03364.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:28:24 Download gff for
MXO03364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4709-PA | 1..610 | 9..622 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:22 Download gff for
MXO03364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4709-RA | 61..670 | 9..622 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:49:50 Download gff for
MXO03364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4709-RA | 61..670 | 9..622 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:49:50 Download gff for
MXO03364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9954514..9954534 | 9..29 | 100 | -> | Plus |
| 2L | 9954596..9955184 | 30..622 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:22 Download gff for
MXO03364.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9954514..9954534 | 9..29 | 100 | -> | Plus |
| arm_2L | 9954596..9955184 | 30..622 | 99 | | Plus |
