MXO03365.5prime Sequence
606 bp (598 high quality bases) assembled on 2007-06-15
> MXO03365.5prime
CAGTCGACATGGCAGGCAGGCTACCGGCATGCGTAATCGATGTGGGCACC
GGCTACTCCAAACTGGGATTTGCCGGGAATAAAGAGCCGCAGTTCATTAT
TCCCTCGGCGATTGCCATCAAGGAGTCGGCACGAGTGGGAGACACCAACA
CACGGCGCATCACAAAGGGCATCGAGGACCTGGACTTCTTCATCGGCGAT
GAGGCCTTCGATGCCACCGGCTACTCCATCAAGTATCCGGTGCGTCATGG
TCTGGTGGAGGACTGGGACTTGATGGAGCGCTTTCTGGAGCAGTGCGTCT
TTAAGTATCTGCGCGCCGAGCCTGAGGATCACTACTTCCTGCTGACTGAG
CCGCCGCTAAATACGCCCGAAAATCGGGAGTACACCGCGGAGATAATGTT
TGAGACGTTCAACGTTCCTGGTCTGTATATCGCCGTCCAGGCGGTGCTTG
CCCTAGCCGCCAGTTGGGCCTCCCGGTCCGCAGAGGAGCGTACCCTTACA
GGCATCGTGGTGGACAGCGGCGATGGAGTGACGCACGTCATACCCGTGGC
CGAGGGCTATGTGATCGGCTCCTGCATCAAGCACATTCCCATCGCGGGCC
GCAATA
MXO03365.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:28:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7558-PA | 1257 | Arp66B-RA | 1..598 | 9..606 | 2990 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arp3-RB | 1585 | CG7558-RB | 177..775 | 8..606 | 2995 | 100 | Plus |
| Arp3-RA | 1983 | CG7558-RA | 177..775 | 8..606 | 2995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8115029..8115346 | 549..232 | 1590 | 100 | Minus |
| 3L | 28110227 | 3L | 8115408..8115589 | 233..52 | 910 | 100 | Minus |
| 3L | 28110227 | 3L | 8114736..8114794 | 606..548 | 295 | 100 | Minus |
| 3L | 28110227 | 3L | 8115682..8115726 | 52..8 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:33:34 has no hits.
MXO03365.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:28:32 Download gff for
MXO03365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7558-PA | 1..597 | 9..605 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:48 Download gff for
MXO03365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arp3-RA | 170..774 | 1..605 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:19:40 Download gff for
MXO03365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arp3-RA | 170..774 | 1..605 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:19:40 Download gff for
MXO03365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8115030..8115344 | 234..548 | 100 | <- | Minus |
| 3L | 8115408..8115588 | 53..233 | 100 | <- | Minus |
| 3L | 8115682..8115733 | 1..52 | 96 | | Minus |
| 3L | 8114737..8114793 | 549..605 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:48 Download gff for
MXO03365.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8108130..8108444 | 234..548 | 100 | <- | Minus |
| arm_3L | 8108508..8108688 | 53..233 | 100 | <- | Minus |
| arm_3L | 8108782..8108833 | 1..52 | 96 | | Minus |
| arm_3L | 8107837..8107893 | 549..605 | 100 | <- | Minus |
