MXO03368.5prime Sequence
546 bp (546 high quality bases) assembled on 2007-06-15
> MXO03368.5prime
CAGTCGACATGCGTTCCTTACCGATGTCTTGGCGCATGGCCGAGGAGATG
GCACGGATGCCACGCCTCTCCTCGCCCTTTCACGCCTTCTTCCACGAGCC
GCCCGTTTGGAGTGTGGCGCTACCGAGGAACTGGCAGCAGATTGCCCGCT
GGCAGGAGCAGGAGTTCGCTCCGCCGGCCACCGTCAACAAGGATGGCTAC
AAACTCACCCTGGACGTCAAGGACTACAGCGAGCTAAAGGTCAAGGTGCT
GGACGAGAGCGTTGTCCTGGTGGAGGGAAAATCAGAGCAGCAGGAGGCCG
AACAAGGTGGCTATAGCTCCAGGCACTTCCTCCGCCGCTTCGTCCTGCCG
GAAGGATACGAGGCGGACAAGGTGACCTCAACGCTGAGCAGCGACGGCGT
CCTGACCATCAGTGTGCCCAATCCTCCAGGCGTGCAGGAGACACTCAAGG
AGCGTGAGGTGACCATCGAGCAGACTGGCGAGCCGGCAAAGAAGTCCGCC
GAGGAGCCAAATGACAAAGCCGCCAGTCAGGCAAGCTTTCTAGACC
MXO03368.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:28:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4460-PA | 525 | Hsp22-RA | 1..522 | 9..530 | 2585 | 99.8 | Plus |
| CG4460-PB | 525 | Hsp22-RB | 1..522 | 9..530 | 2585 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:22:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp67Bb-RB | 1900 | CG4456-RB | 1187..1708 | 9..530 | 2595 | 99.8 | Plus |
| Hsp22-RB | 968 | CG4460-RB | 255..776 | 9..530 | 2595 | 99.8 | Plus |
| Hsp22-RA | 1900 | CG4460-RA | 1187..1708 | 9..530 | 2595 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:22:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9374251..9374772 | 9..530 | 2595 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:22:53 has no hits.
MXO03368.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:28:47 Download gff for
MXO03368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4460-PB | 1..525 | 9..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:20:57 Download gff for
MXO03368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Bb-RB | 1187..1708 | 9..530 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:10:02 Download gff for
MXO03368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp22-RA | 1187..1708 | 9..530 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:10:02 Download gff for
MXO03368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9374251..9374772 | 9..530 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:20:57 Download gff for
MXO03368.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9367351..9367872 | 9..530 | 99 | | Plus |
