MXO03375.5prime Sequence
607 bp (461 high quality bases) assembled on 2007-06-15
> MXO03375.5prime
CAATCGACATGCTGACGACGTCTTCAAGCACAATGCTTGGTAAATATGGG
TGGCAAATCCTCCGGAGATTGGCCAGCAAAAGTTGGGAACACACTCGCCA
GCGTAAAAAACCGTCGGGAGCGGGCAGCCGGGTGCTCACCGACGCGCGAG
AGGTGTTCGAGTTTAACGCCTGGGACCACGTGCAATGGGATGAAGAGCAG
GAACTGGCCGCGAAGGCGGCTGTAGCCAAGAATTCAACCTCAAAGATGGA
AGCGGAGCAGAAGGAGCGATTTCAGACAGACGCCCCCAAGTTTTGGGATT
CCTTCTACGGCATTCACGACAACCGCTTCTTCAAGGATCGCCACTGGCTG
TTTACGGAGTTCCCCGAACTATCTCCTCTGGCGGCGGATTCGGCGGTACT
GCAACCACGTAGCATTTTCGAACTGGGCTGTGGAGTAGGAAACACAATTT
TACCCCTTCTACAGTACAGCTCTGAACCGCAGCTCAAGGTTTTCGGATGT
GACTTCTCCGCCCGGGCCATTGATATCCTGCAAAGCCAACGGCAGTTCGA
CGAGAAGCGCTGCAAGGTGTTTGTCATGGATGCCACGCTGGATCATTGGC
ATGCGCC
MXO03375.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:29:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13929-PB | 978 | metl-RB | 1..593 | 9..601 | 2840 | 99.1 | Plus |
| CG13929-PA | 909 | metl-RA | 94..524 | 171..601 | 2030 | 98.8 | Plus |
| CG13929-PA | 909 | metl-RA | 65..96 | 9..40 | 160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| metl-RB | 1240 | CG13929-RB | 164..756 | 9..601 | 2890 | 99.2 | Plus |
| metl-RA | 1107 | CG13929-RA | 193..623 | 171..601 | 2080 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1638426..1638855 | 601..172 | 2075 | 98.8 | Minus |
| 3L | 28110227 | 3L | 1638908..1639072 | 173..9 | 825 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:10:50 has no hits.
MXO03375.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:29:31 Download gff for
MXO03375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13929-PB | 1..599 | 9..607 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:59 Download gff for
MXO03375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| metl-RB | 159..762 | 1..607 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:51:56 Download gff for
MXO03375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| metl-RB | 159..762 | 1..607 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:51:56 Download gff for
MXO03375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1638420..1638854 | 173..607 | 98 | <- | Minus |
| 3L | 1638909..1639077 | 1..172 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:53:59 Download gff for
MXO03375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1638420..1638854 | 173..607 | 98 | <- | Minus |
| arm_3L | 1638909..1639077 | 1..172 | 97 | | Minus |
