MXO03383.5prime Sequence
560 bp (397 high quality bases) assembled on 2007-06-15
> MXO03383.5prime
CAGTCGACATGGATTTCACGGGCTTTGACCTGCGAAAGTGCCCACCGACT
GTCATGTACATTCCGAACTTCATCACTTCCGAGGAGGAGCAGCGCATCCT
GAGCCACATCGAGCGCACTCCGAAGCCTCGATGGACGCAGCTGCTGAACC
GCCGGCTGGTCAACTACGGCGGTGTGCCGCATCCCAACGGAATGATTGCC
GAGGAGATTCCGGAGTGGCTGCAGACCTATGTGGACAAGGTCAACAATCT
GGGGGTGTTCGAGTCGCAGAACGCTAACCATGTTTTGGTCAACGAGTATC
TGCCGGGTCAGGGAATTCTGCCGCACACAGATGGACCACTGTTCCATCCC
ATCATCTCCACCATTTCCACGGGTGCTCATACCGTGCTGGAGTTTGTCAA
GCGTGAGGACACCACAACTGAAACAGAAGCTGGAGATCAGACGACCCGTG
AAGTGCTCTTCAAGCTGCTGCTGGAACCGCGCAGCCTGCTCATCCTCAAG
GACACGCTGTACACCGACTATCTGCACGCCATCTCCGAGACTAGCGAGGA
TGTGCTCTGC
MXO03383.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:29:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6144-PA | 687 | CG6144-RA | 1..552 | 9..560 | 2710 | 99.6 | Plus |
| CG6144-PB | 687 | CG6144-RB | 1..552 | 9..560 | 2710 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6144-RC | 1553 | CG6144-RC | 113..665 | 8..560 | 2735 | 99.6 | Plus |
| CG6144-RB | 1705 | CG6144-RB | 265..817 | 8..560 | 2735 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10489050..10489573 | 37..560 | 2620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:11:36 has no hits.
MXO03383.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:29:58 Download gff for
MXO03383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6144-PB | 1..552 | 9..560 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:58:34 Download gff for
MXO03383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6144-RB | 259..817 | 1..560 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:44:46 Download gff for
MXO03383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6144-RB | 259..817 | 1..560 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:44:46 Download gff for
MXO03383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10489052..10489573 | 39..560 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:58:34 Download gff for
MXO03383.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10489052..10489573 | 39..560 | 100 | | Plus |
