MXO03384.5prime Sequence
649 bp (610 high quality bases) assembled on 2007-06-15
> MXO03384.5prime
CAGTCGACATGCCACCCACGATCAACACCTCGGCGGTAAACAGTGCCGCC
GAAAAGCGACCCCAGCGGCAAACGGAGCGCAAATCCGAGATCATTTGCCG
CGTGAAGTATGGAAACAACCTGCCGGATATACCATTTGATCTGAAGTTTC
TGCAGTACCCCTTCGACAGCCACCGCTTCGTGCAGTACAACCCAACGTCG
CTAGAGCGTAACTTCAAGTATGACGTGCTGACGGAACACGATTTGGGTGT
CACGGTGGACCTGATTAACCGGGAGCTCTATCAGGCCGACTCCATGACGC
TGCTGGACCCCGCCGATGAAAAACTGCTGGAGGAGGAGACTCTGACGCCC
ACAGACTCTGTGCGTTCGCGCCAGCATTCGAGGACGGTGTCATGGTTGCG
CAAATCCGAGTACATCTCCACCGAGCAGACGCGCTTCCAGCCCCAGAACC
TGGAGAACATCGAGGCCAAGGTCGGTTACAACGTCAAGAAGTCGCTTCGG
GAGGAGACTCTCTACCTGGACCGCGAAGCCCAGATCAAAGCCATCGAGAA
GACCTTCAGCGACACCAAGAGCGAAATTACCAAGCACTATTCCAAGCCCA
ATGTGGTGCCAGTGGAGGTACTGCCTATCTTCCCCGACTTTCCCAACTG
MXO03384.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:30:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2503-PA | 1617 | atms-RA | 1..632 | 9..640 | 3110 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| atms-RB | 2040 | CG2503-RB | 373..1013 | 9..649 | 3145 | 99.4 | Plus |
| atms-RA | 1769 | CG2503-RA | 102..742 | 9..649 | 3145 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4775834..4776404 | 79..649 | 2810 | 99.5 | Plus |
| 3R | 32079331 | 3R | 4775706..4775779 | 9..82 | 340 | 97.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:41:36 has no hits.
MXO03384.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:30:06 Download gff for
MXO03384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2503-PA | 1..641 | 9..649 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:22 Download gff for
MXO03384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| atms-RA | 94..742 | 1..649 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:12 Download gff for
MXO03384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| atms-RA | 94..742 | 1..649 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:12 Download gff for
MXO03384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4775698..4775779 | 1..82 | 92 | -> | Plus |
| 3R | 4775838..4776404 | 83..649 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:22 Download gff for
MXO03384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 601420..601501 | 1..82 | 92 | -> | Plus |
| arm_3R | 601560..602126 | 83..649 | 99 | | Plus |
