MXO03388.5prime Sequence
270 bp (238 high quality bases) assembled on 2007-06-15
> MXO03388.5prime
CAGTCGACATGGATTCGAAGTTCTTTAAACTGCTCCTGCTGGGCGGCGCC
GTGCGCTTCTACTTCTGTCGCACGCCGCTGGCTCCGATGATTGGCAACCG
AGTGGAGTTCGCGACACCTTTAAATTCACACAAGCGCATGCAAGAGGGGA
TATTTCTTCTACAGAGTGGCATTGATCCCTATCTGGGCGACCTGGTACAC
GAATCGCCGCTGATACTCAGCGCGCTCTCCGGATTGTTTCAAAATACCCG
CAGTTTCTGCCGATATTCTA
MXO03388.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:30:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13089-PA | 1281 | CG13089-RA | 1..236 | 9..244 | 1180 | 100 | Plus |
CG13089-PA | 1281 | CG13089-RA | 234..263 | 241..270 | 150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
PIG-U-RA | 1478 | CG13089-RA | 58..320 | 9..270 | 1290 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8515153..8515282 | 9..138 | 650 | 100 | Plus |
2L | 23513712 | 2L | 8515343..8515475 | 139..270 | 615 | 99.2 | Plus |
Blast to na_te.dros performed 2014-11-28 19:58:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
springer | 7546 | springer SPRINGER 7546bp Derived from BACR06P08 by Sue Celniker, 29 March 2001. | 3472..3534 | 269..206 | 119 | 67.2 | Minus |
MXO03388.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:30:34 Download gff for
MXO03388.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13089-PA | 1..262 | 9..269 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:38 Download gff for
MXO03388.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PIG-U-RA | 58..319 | 9..269 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:35 Download gff for
MXO03388.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
PIG-U-RA | 58..319 | 9..269 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:35 Download gff for
MXO03388.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8515153..8515282 | 9..138 | 100 | -> | Plus |
2L | 8515343..8515474 | 139..269 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:38 Download gff for
MXO03388.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8515153..8515282 | 9..138 | 100 | -> | Plus |
arm_2L | 8515343..8515474 | 139..269 | 99 | | Plus |