MXO03407.5prime Sequence
659 bp (609 high quality bases) assembled on 2007-06-15
> MXO03407.5prime
CAGTCGACATGCATTCGGCTGGACTACTGATGCTAACCGTGGCTGGATAT
TTCACATCGGGTATTCCTGGCAATACGGCTTCCTCGGACGTCGCCTACCT
GACGCCGGGCACATACATCAATTTGTCGGAGAACATCTTGGGACTGCAGA
CTCTGCGCACGTTCTGCTATCCGGGTAAACGGCTGACGGTGTCAAGTCTC
TTCGAGACTGTGGAGTTCGTCCTGGCCATCGGGAGCGATGATTATTCCCA
GTACGGTGGGAAGACGCCGGAGGAGGTGTTGCAGCACTACAAGGACAAGC
AATCGCTGTTCAGCATCACCCTGTTCGCGCAGAAGCGCCAGCTGCTGCAG
CTCTCGCCCTTCGAGCAGCAGTGCATCGGGATTTCCTCCCGTCATGCGTA
CACCGCCATTCTGAATAGCATTCCGCTGGATCTGTGGCGTCTCGCACAGT
TCGCCGTCGGCATACTGATCCTCTTCAGCGCCCGGCGGCTAGCAAAGAAC
AGTGTGTTCTACTATCTGGTCGGCATTGTCATCGGCATATGCGCCTCCCT
GCTGGTGGTCATCTATTTGGCCGCCAAACTCTTTCCGCGACGTACCATGA
TGTATGGCGTCCTAATTGGCGGCTGGACCATTGGCTTCTATGTGATCAAA
CAGCTGGCG
MXO03407.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:31:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9723-PA | 1365 | CG9723-RA | 1..651 | 9..659 | 3180 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9723-RA | 1729 | CG9723-RA | 149..799 | 9..659 | 3210 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16654217..16654867 | 659..9 | 3210 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:11:20 has no hits.
MXO03407.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:31:49 Download gff for
MXO03407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9723-PA | 1..651 | 9..659 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:17 Download gff for
MXO03407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9723-RA | 145..799 | 1..659 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:09 Download gff for
MXO03407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9723-RA | 145..799 | 1..659 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:09 Download gff for
MXO03407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16654217..16654871 | 1..659 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:17 Download gff for
MXO03407.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16548250..16548904 | 1..659 | 98 | | Minus |
