MXO03413.5prime Sequence
673 bp (672 high quality bases) assembled on 2007-06-15
> MXO03413.5prime
CAGTCGACATGACTGCCACCAAAAAGCGTCTGAAGATCGTTGCAGCCATC
TCGCTGCTCCTCCTGCTCCTGGTCTACCTTTACCGAATGGCCAGCTTCTG
CCCAAGCGGAAAGGTCGCCGTTTCCGTTCCCGGCGTCGAGGAGGTTCAGG
CCAAATGGCCGCCCACGGAAAGTCCGCTACAAAGGAGCCTTCAGATGGCG
TACGAGGAGCAGAGCTCTCTTATTCGAGAACAAAAGGCCGAACTCCAGCG
CACAAGGGAGAATTTGGCCAGATTGGAGGAACAAGTTCGTAGCCTCCAGA
CCAGCACACCGCGCAAGTATCCGAAGGTTAAATACCTGAACTATAAGAAT
CGCAAACGCATACTAATTACCGGAGGAGCTGGCTTCGTGGGCTCCCACTT
GGTCGACGATCTGATGGTCCAGGGGCACGAGGTCATCGTGGTGGACAATT
TCTTTACGGGACGCAAGCGAAATGTCGAGCACTGGCTGGGGCACGAGAAC
TTCGAGCTCATCCACCACGACATAGTGAATCCGCTTTTCATCGAGATCGA
TGAGATCTACCACTTGGCATCGCCAGCCTCGCCACCGCATTACATGTACA
ATCCGGTGAAGACCATCAAGACCAACACCATGGGCACGATCAATGTACTG
GGTCTGGCCAAGCGCGTGATGGC
MXO03413.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:32:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7979-PA | 1326 | CG7979-RA | 1..665 | 9..673 | 3325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7979-RA | 2093 | CG7979-RA | 119..783 | 9..673 | 3325 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8181041..8181685 | 9..653 | 3225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:41:42 has no hits.
MXO03413.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:32:24 Download gff for
MXO03413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7979-PA | 1..665 | 9..673 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:25 Download gff for
MXO03413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7979-RA | 110..783 | 1..673 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:14 Download gff for
MXO03413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7979-RA | 110..783 | 1..673 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:14 Download gff for
MXO03413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8181032..8181683 | 1..651 | 99 | -> | Plus |
| 3L | 8181751..8181772 | 652..673 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:25 Download gff for
MXO03413.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8174132..8174783 | 1..651 | 99 | -> | Plus |
| arm_3L | 8174851..8174872 | 652..673 | 100 | | Plus |
