MXO03415.5prime Sequence
906 bp (583 high quality bases) assembled on 2007-06-15
> MXO03415.5prime
CAGTCGACATGTTGAAAGCACGGAACGTTTGTTTGCTGTCCAGGAGGTGG
AAGAGTGGCGCCAAGAAGCGATGGAATGTCCTGCAGAACAAGAAGAACAA
CTGTGACCGAGCGCTGGAGAACTTCGATGACTTCTACGGAAGTGTCTACG
GCACCCGGTGGAAGAACATGCGGGCGGCGCTTCTCACGAGGCACAAGTAT
GTCGCCCTGGTCAACAATTTCGGGGACACGGAGCAGACGTGCGCCATGCT
GGAGTCAGATGGAGCCATCAACATGAAGTCGCTTATTAACCTGGCGCAGG
ATCGGGTAAAGGACAGCACGGAGACGGTGCCGGAACAAGGCAAATCACGT
CATGAAATTGAAAGCAAACTGGATGCACTGCTGCGGATACAGCACGAGCG
CGAGGTGGCCTCCATATACCCGAGCTCGCCAGAAGATGGTTCATCGGCGC
CACTGCCGCTGGAACTGAAGTTTGACAACGTAGAGGAAGATCAGCCGGAG
CAAGTGAATAATCCCTTCAAGCAGAGCCTGACGAAGGCTTTGGAGGAGGA
TGTGAAGCTGGACGAGCATCGGTTGGTGGATCCCCCATTTTGGCACAGGC
GGACTGTATGAATACATGCCTGCCCACAGCATCAAGGGCATGGAGGACTG
GGTGGCAGAGTCGGAGCACTACCAGTACTACCAAACCAGCGCCGACTTCC
CGCTCGCCATTGAACCGGAGCCTTCCTTTCACTACCCCGAGCATCTGTCC
CTGTACACATATGAAATGGGCAACTGCTCGGACTTCAAGGGACCCAAGAA
GTGCATGACCGGTGTGCTCTCCCACTTTATGATGGATGGTGCCTCGACTT
TGCCGCCTCTCTTCCTGCAGGTGAAGCCTGGCGAGCGTGTGCTCGATGCC
TGTGCC
MXO03415.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:32:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4749-PA | 1512 | CG4749-RA | 1..577 | 9..585 | 2835 | 99.6 | Plus |
| CG4749-PA | 1512 | CG4749-RA | 574..897 | 583..906 | 1570 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:49:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4749-RA | 1628 | CG4749-RA | 44..940 | 9..906 | 4405 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:49:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 1147865..1148761 | 9..906 | 4380 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:49:21 has no hits.
MXO03415.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:32:39 Download gff for
MXO03415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4749-PA | 1..897 | 9..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:46:19 Download gff for
MXO03415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4749-RA | 44..940 | 9..906 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:34:04 Download gff for
MXO03415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4749-RA | 44..940 | 9..906 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:34:04 Download gff for
MXO03415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 1147865..1148761 | 9..906 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:46:19 Download gff for
MXO03415.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 1147865..1148761 | 9..906 | 99 | | Plus |
