MXO03418.5prime Sequence
775 bp (678 high quality bases) assembled on 2007-06-15
> MXO03418.5prime
CAGTCGACATGGCCCAACCCAGTGCCCGTGTGCTCCAAAGCGGCATGCGC
CTGCCTCCAATGCCCACAATTCGGGAGCTGGTGAAGCTATACAGACTACA
GGCCAGGAAACAGCTTAGCCAGAACTTCCTCATGGACGAGCGGCTCACGG
ACAAGATAGTCAAGTCGGCGGGACGCATCGATCCCCGGGATTTAGTTCTT
GAGGTGGGTCCCGGGCCGGGCGGTATCACGCGCTCGATTCTGCGTCGTCA
CCCACAGCGATTGTTGCTTGTGGAGAAGGATCCGCGCTTCGGCGAAACAC
TGCAGTTGCTCAAGGAATGCGCCAGTCCACTAAACATCCAGTTCGACATC
CACTATGATGACATCCTGCGCTTCAACATTGAGCATCACATCCCGCACAC
CTCACAGCGGATCCATCTGATTGGCAACCTGCCGTTCGCCATATCCACTC
GACTGTTGATCAATTGGCTTGATGATTTGGCCGCCAGGCGTGGTGCTTTC
CGGCGCATCGACACCTGTATGACTCTTACCTTCCAGCAAGAGGTGGCCGA
GCGAATTTGTGCCCCTGTAGGCGGCGAACAGCGCTGCCCGGCTCTCGGTG
ATGTCGCAGGTGTGGACGGAACCCGTCATGAAGTTCACCATACCGGGCAA
GGCGTTCGTTCCGAAACCACAGGTGGATGTGGGCGTCGTCAAGCTAATTC
CCCTAAAGCGCCCTAAGACTCAATTGCCGTTTCACCTAGTTGAGCGCGTA
GTCCGTCACATCTTTAGCATGCGCC
MXO03418.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:32:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7319-PA | 993 | CG7319-RA | 1..580 | 9..588 | 2850 | 99.6 | Plus |
| CG7319-PC | 1557 | CG7319-RC | 565..1144 | 9..588 | 2850 | 99.6 | Plus |
| CG7319-PA | 993 | CG7319-RA | 579..766 | 588..775 | 940 | 100 | Plus |
| CG7319-PC | 1557 | CG7319-RC | 1143..1330 | 588..775 | 940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:34:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mtTFB1-RA | 1529 | CG42631-RA | 458..1223 | 9..775 | 3780 | 99.6 | Plus |
| Ccdc56-RA | 1529 | CG42630-RA | 458..1223 | 9..775 | 3780 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11709499..11710264 | 9..775 | 3755 | 99.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:34:57 has no hits.
MXO03418.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:32:54 Download gff for
MXO03418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7319-PC | 560..1330 | 2..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:29:27 Download gff for
MXO03418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ccdc56-RA | 454..1223 | 1..775 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:50 Download gff for
MXO03418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ccdc56-RA | 454..1223 | 1..775 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:50 Download gff for
MXO03418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11709499..11710264 | 9..775 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:29:27 Download gff for
MXO03418.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11702599..11703364 | 9..775 | 99 | | Plus |
