MXO03427.5prime Sequence
572 bp (571 high quality bases) assembled on 2007-06-15
> MXO03427.5prime
CAGTCGACATGTCGCTAGCCGATGAGCTTTTAGCCGATCTCGAGGAAGAC
AATGACAATGAGCTGGAGGAGGAGGATTCGGAGATGGCCAGTGCAGAGGA
CGAGAGCTTGCTGGCGGAGAAGCTGGCTAAGCCGGCTCCCAATCTGATGG
ACGTGGATGTAACCGTGCAGTCGGTGCGGGAACTGTGCAAGCTGCGCGAC
TCTGAGCGCCTGAAGAACACGCTGCAGCAGATCGAGCACTATGCCAGTCG
CCAGAGAACTGCAGCCGAAATGCTGGGATCCGTAGAATCCGATCCAGAGT
ACTGCCTCATCGTGGACGCTAATGCCATAGCTGTGGACATTGACAACGAG
ATCTCCATTGTGCACAAGTTCACCAAGGAGAAGTATCTGAAGCGATTCCC
CGAATTGGACTCCCTGATCGTGGGTGAAATCGAGTACTTGCTGGCGGTCA
AGGAGCTGGGCAACGACCTGGACCAGGTCAAAAATAACGAGAAGCTGCAG
GCTATTCTCACGCAGGCCACCATTATGATTGTGTCAGTCACGGCGTCCAC
CACACAGGGAACCATGCTGACA
MXO03427.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:33:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6876-PA | 1506 | CG6876-RA | 1..564 | 9..572 | 2795 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:34:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Prp31-RA | 1862 | CG6876-RA | 71..634 | 9..572 | 2805 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:34:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15159325..15159776 | 108..559 | 2245 | 99.8 | Plus |
| 3L | 28110227 | 3L | 15159170..15159268 | 9..107 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:34:27 has no hits.
MXO03427.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:33:41 Download gff for
MXO03427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6876-PA | 1..563 | 9..571 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:22 Download gff for
MXO03427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp31-RA | 63..633 | 1..571 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:09 Download gff for
MXO03427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prp31-RA | 63..633 | 1..571 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:09 Download gff for
MXO03427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15159162..15159268 | 1..107 | 96 | -> | Plus |
| 3L | 15159325..15159776 | 108..559 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:22 Download gff for
MXO03427.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15152262..15152368 | 1..107 | 96 | -> | Plus |
| arm_3L | 15152425..15152876 | 108..559 | 99 | -> | Plus |
