MXO03430.5prime Sequence
594 bp (578 high quality bases) assembled on 2007-06-15
> MXO03430.5prime
CAGTCGACATGACGACGGCCGTGCTGGGAGGCGGATTGAGTGGACTATCC
GCCGGATACTACCTGTTGCGGCGATTCGGGAAGCCGCTGACCATCTACGA
GGCCTCGCCCCGTGTGGGCGGATGGGTGCGGTCGGAGAATCGCAAGGATC
GCAACTTCATCTTCGAGAGCGGACCGCGAACCATACGCCCAGTTGGTGAG
CCAGGTGCCAATACGCTAGAATTGGTGGAGGATCTGAAGCTGGAGGTGAC
TCCCATTCGACGCAGTCATGTCGCAGCACGCAACCGAATGCTGTATGCCA
AGGGACAGCTCTGCATGCTGCCCAACAGTCCCAAGGGTCTCTTCGGCGTC
CTGCCTCCCTTCACGAAGCCGCTATACAAAGCGGTTCTTCGCGATCTGTT
CACAGCAAGCAAGAAAGCGAAGCTGGAGGATGAGAGCATCTACAGTTTCG
CTGAGCGGCGGTTTGGTAAGGAGATAGCCGACTACGCCATCAGTCCCATG
ATCTGCGGTATTTGCGCCGGTGACGCGCGAGAAATAAGTGTGCGCTTCCT
GATGGAGGGGCTCTTTGAAAAGGAACAGAAGTACGGAGGAGTGC
MXO03430.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:33:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5796-PA | 1428 | Ppox-RA | 1..586 | 9..594 | 2930 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ppox-RA | 1655 | CG5796-RA | 126..712 | 8..594 | 2935 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24661140..24661726 | 594..8 | 2935 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:58:43 has no hits.
MXO03430.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:33:56 Download gff for
MXO03430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5796-PA | 1..586 | 9..594 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:53 Download gff for
MXO03430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ppox-RA | 117..712 | 1..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:32:49 Download gff for
MXO03430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ppox-RA | 117..712 | 1..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:32:49 Download gff for
MXO03430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24661140..24661731 | 1..594 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:53 Download gff for
MXO03430.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20486862..20487453 | 1..594 | 99 | | Minus |
