MXO03432.5prime Sequence
712 bp (575 high quality bases) assembled on 2007-06-15
> MXO03432.5prime
CAGTCGACATGGCGTCCAAGGAAAACATTGCTGACAACATGGAGAAGTTC
TCGCTTAAGAGCCCGAGCAAGAAGATTCTGACGGATAGCACCAACAACGT
TCGCAAGATGTCCATTGGACACGAGGCAAACGGACAGTTGGCCAAGGAGT
CCTCCACCGTGAATGGCATCGGCAAGTCTGCCAATTCCCTCATGGAGAAG
TCCGTAACCCCCTTCGACCCGTCGCTGGAGCCCCTTCTGCGCGAGAATCC
CCGACGCTTCGTCATCTTTCCCATCCAGTACCACGACATCTGGCAGATGT
ACAAGAAGGCTGAGGCTTCTTTCTGGACTGTCGAGGAGGTGGATTTGTCC
AAGGACCTTACTGATTGGCACCGCCTGAAGGACGACGAGCGCCATTTCAT
CTCGCACGTGCTTGCCTTCTTCGCCGCCTCCGACGGCATCGTAAACGAGA
ACCTGGTGGAGCGCTTCAGTCAGGAGGTGCAGATCACGGAGGCACGTTGC
TTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAGATGTACAG
TGTTTTGATCGACACTTACATCCGTGATCCACACCAGCGAGAGTACCTGT
TTAACGCTATCGAAACGATGCCGGCTGTGAAGCGCAAGGCAGACTGGGCC
CTGTCCTGGATCTCCTCCAAATCGGCCAACTTCGGGGAACGCATCATCGC
CTTTGCCGCCGT
MXO03432.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:34:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8975-PA | 1182 | RnrS-RA | 1..704 | 9..712 | 3520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RnrS-RA | 1593 | CG8975-RA | 128..831 | 9..712 | 3520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:34:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11983907..11984312 | 712..307 | 2030 | 100 | Minus |
| 2R | 25286936 | 2R | 11984818..11985069 | 309..58 | 1260 | 100 | Minus |
| 2R | 25286936 | 2R | 11985216..11985266 | 59..9 | 255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:35:00 has no hits.
MXO03432.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:34:10 Download gff for
MXO03432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8975-PA | 1..704 | 9..712 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:29:28 Download gff for
MXO03432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RnrS-RA | 120..831 | 1..712 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:17:52 Download gff for
MXO03432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RnrS-RA | 120..831 | 1..712 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:17:52 Download gff for
MXO03432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11983907..11984310 | 309..712 | 100 | <- | Minus |
| 2R | 11984819..11985067 | 60..308 | 100 | <- | Minus |
| 2R | 11985216..11985271 | 1..59 | 93 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:29:28 Download gff for
MXO03432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7871412..7871815 | 309..712 | 100 | <- | Minus |
| arm_2R | 7872324..7872572 | 60..308 | 100 | <- | Minus |
| arm_2R | 7872721..7872776 | 1..59 | 93 | | Minus |
