MXO03438.5prime Sequence
885 bp (774 high quality bases) assembled on 2007-06-15
> MXO03438.5prime
CAGTCGACATGAGCAACATCAGCAACGACAGTGGATTGGATGACTCCGCG
AACAGTGGAGCCGTTGTCAGCGCCAATGGACCATTGGCAGCGACTCGGTT
ATCCTGGTTCCTGGCCGAAGTCGATGACGGCTTGATGAAGGATGGGAAGC
CAAATGGTCGACGCCGTCTCTGCGTTCTCCATTCGATGGAACTCCTAGAG
TCAGATGTTTCAGACAAATACATGACCCGATTCGTAGAATTCCGGGTCAA
TGGAATGGTGCTGGAGGCGAAACTCATACTGGCAGCGGATGAGAGGCGCC
TGGTGGATGCAGCATTGCTGTCCATGAGCAAGGAGGAGAGGGAAGATGCC
GGCGGCCAGCAACTGTTGGTCCAGTACACCGAGATTGAAAAGGCGGGCGA
GCGCCTCATCCAGAAACTTGTTTCTCCAAACAATGTAATGCTGCTGAGCA
CCAAGCCCGAGCTGAAGGGTAATCCTCTGGTGAGGTTGGCTCCCGGCTGC
ATTGCCCACATCCTATATGCCTACGAAAGTCGTGATTATATGGAAAAGAT
ACTACTGCACCTGAAAGCGCGAAGCTTTGATCTCGCCTTCGATGATAATT
TGGAAGCTGAACCGGAGGCCATGAATGATGACACTTGGATGCTGGTGCAA
TACAGTCCCGAACCGGAGATGGTGGTATACCAGGTGGTGCAGTACAGACA
AACCGTGTGGAGGAAAGAGAATCTCTTTAAGGACGTTATTGCCTACATGC
AACTTCCTGGTAGCGACATCGTCCTCCAGGCGGTGGTCATCAGCTATGGC
CAGGACAAAGAGGTCCAGGACGCGAAGTATGAGGAGTTGCAACGATTCTC
TTTTGATATTGACTTTCCACTGCCCGAAGAACTGG
MXO03438.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:34:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15634-PA | 1140 | CG15634-RA | 1..877 | 9..885 | 4360 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:41:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Elba3-RA | 1446 | CG15634-RA | 138..1015 | 8..885 | 4375 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:41:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4687648..4688525 | 8..885 | 4375 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:41:48 has no hits.
MXO03438.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:34:38 Download gff for
MXO03438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15634-PA | 1..877 | 9..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:30 Download gff for
MXO03438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba3-RA | 131..1015 | 1..885 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:18 Download gff for
MXO03438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Elba3-RA | 131..1015 | 1..885 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:18 Download gff for
MXO03438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4687641..4688525 | 1..885 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:30 Download gff for
MXO03438.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4687641..4688525 | 1..885 | 99 | | Plus |
