MXO03453.5prime Sequence
571 bp (547 high quality bases) assembled on 2007-06-15
> MXO03453.5prime
CAGTCGACATGGAATCGGAGACGAAAGCGAGCGCCGAGGAGAAGCAGCAG
GAGAACCCCTCGACAGTGCCCATGGACACGCTGGATCCGCCGCCACCGTG
TGGCAGCTCCAAGACCCTCAAACGCTGCCTCAGTGTGCCAATAATCCGGA
CTCCGCCGGCGGGCAAATCGGGAAAGACGCCGATGACCACACGCGCAGCC
GCAGCGGCTGCTCTGGCGGCCAAGGAGCACGAGCAGACGCCCAAGAAGAG
CCAACAGGTGGTGGATATCCAAATGCCGAATGCCCCATCCATCGATTGCT
TCGGCAAGAACATACACATACGATCGCAGCCCAATTCCAGGGAGGTTTCA
CCGGCTCCCGTCTTCAATATATTCACACCTCGAGCCAGAAGGTATTCGGC
CAGCTATAGTCCACTGACCACGGCAGCCAATGGAGCCACTCTCTGTCTCA
CGCCTCGAGTTTCGCAGCTGCGGCAGGAGGAATGCGCAGATCTAAACAGC
CGGGAGGTTAACCATGAGCGGGAAGTTCATCGGGAAATACAAATTTCGCA
GAGCTGGGAGGATCTCACGCT
MXO03453.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:36:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4497-PA | 1521 | CG4497-RA | 1..563 | 9..571 | 2815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:10:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4497-RB | 2741 | CG4497-RB | 250..812 | 9..571 | 2815 | 100 | Plus |
| CG4497-RA | 2566 | CG4497-RA | 75..637 | 9..571 | 2815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:10:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7192801..7193363 | 571..9 | 2815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:10:49 has no hits.
MXO03453.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:36:02 Download gff for
MXO03453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4497-PA | 1..563 | 9..571 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:33 Download gff for
MXO03453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4497-RA | 70..637 | 1..571 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:09 Download gff for
MXO03453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4497-RA | 70..637 | 1..571 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:09 Download gff for
MXO03453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7192801..7193368 | 1..571 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:33 Download gff for
MXO03453.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7192801..7193368 | 1..571 | 99 | | Minus |
