MXO03458.5prime Sequence
577 bp (572 high quality bases) assembled on 2007-06-15
> MXO03458.5prime
CAGTCGACATGTGGCTGCTGTTGCCTATTCTGCTATATTCGGCGGTATTC
CTCTCGGTGCGGCACATTTACAGCCACTGGCGACGCAGGGGATTCCCCTC
GGAAAAGGCCGGCATTACGTGGAGTTTCCTGCAAAAGGCCTACAGACGGG
AGTTCCGACACGTGGAGGCCATCTGTGAGGCCTACCAGTCGGGCAAGGAT
CGGCTTCTGGGCATCTACTGCTTCTTCAGGCCTGTCCTTCTGGTGCGAAA
TGTGGAGCTAGCCCAGACGATTCTGCAGCAATCAAATGGACACTTCAGCG
AACTGAAGTGGGACTATATCTCGGGTTATCGCAGGTTCAATTTGCTGGAG
AAACTGGCGCCCATGTTTGGCACCAAACGATTGTCCGAGATGTTCGGGCA
GGTCCAGAAAGTGGGTGATCATTTAATTCACCATTTGCTGGACAGGCAAG
GCCAAGGATGTCCACAGGAAGTGGATATCCAGCAAAAACTCAGAGTTTAT
TCCGTCAACATAATTGCCAATCTGATTTACGGCTTGGACATTAATAACTT
TGAGCACGAGGATCATATCTTGACCAG
MXO03458.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:36:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10391-PA | 1479 | Cyp310a1-RA | 1..569 | 9..577 | 2845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp310a1-RA | 1658 | CG10391-RA | 67..635 | 9..577 | 2845 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18652457..18652944 | 496..9 | 2440 | 100 | Minus |
| 2L | 23513712 | 2L | 18652317..18652397 | 577..497 | 405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:12:08 has no hits.
MXO03458.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:36:31 Download gff for
MXO03458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10391-PA | 1..569 | 9..577 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:54:44 Download gff for
MXO03458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp310a1-RA | 63..635 | 1..577 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:32 Download gff for
MXO03458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp310a1-RA | 63..635 | 1..577 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:32 Download gff for
MXO03458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18652317..18652397 | 497..577 | 100 | <- | Minus |
| 2L | 18652457..18652948 | 1..496 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:54:44 Download gff for
MXO03458.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18652317..18652397 | 497..577 | 100 | <- | Minus |
| arm_2L | 18652457..18652948 | 1..496 | 99 | | Minus |
