MXO03467.5prime Sequence
899 bp (568 high quality bases) assembled on 2007-06-15
> MXO03467.5prime
CAGTCGACATGCTGAAGCATTTTGCACGATGGCGTCTGGGCAGCCAGTTG
CTAAAGGGATGTGCCGCACCAGTGAGGCAAGCCTCCAAAACCTCCAGCGC
AGAGAACCTGATAGCCGGCACAGAGGAACCCCAAAAAAAGTTCGTCAATC
CGTTTTCCCAGCCCGCTCCTGCGTTAAGTAATGATACGATATCAGAGAAC
AAGGAGGAACGGGATAAGCGACTCAAGGTGCTGCAGCTGGAGGCGGACAT
TGCCCACCAGGAGGGTCGGCGGGTGCCGTCACTGGAATTCTTTAAGGATC
ATCATTGGGAGCACGTGCTGACGCTACCCACAAAATCAGCTAGGATCAAG
TACTTTGGCTATCTCTGGCAAATCGAGATGAAGAAGGAGGCGGATCAACG
CAAGAAGGCAGAGCGAGCGAAGGAAGCCGAGCGGCGGGTTGCGGAGATGC
GAAAGGAGCGCGAGGAGAATACGCACATTATCTATGGCCTGGGACACACA
TCGTTGTTTCTGCGTATCTATGATACCACTATTAATCACTGGCAGAACAA
CCGACTCACACGGGCCATGCAGTTTTGCCCCCAAAATGGTTTTGGATTGC
TCCTACGATGAGCACATGAACAATCGGGAGGCTACCTATGCAGCAAAGCA
ATTGATGATGTGCTTTGCGGAGAACCGGATGAATGATGAGCCCTTCGATC
TGCACTATTGCAACACCCAGATGGACAGCAGATGCATGCAGAGCCTCCAA
CGCTACATCCCCACCATGCACAATCCAGAGTTCCCGATAAATTTGCATAG
CAAGTGCTTTACGGAACTCTTTCCCAAGCAGAACCTGGTCTACCTAACGC
CCCACTGCCGGGAGGATCTGGTCACTTACACCCAGATGACATCTACATC
MXO03467.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:37:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5190-PA | 1341 | CG5190-RA | 1..567 | 9..575 | 2835 | 100 | Plus |
| CG5190-PA | 1341 | CG5190-RA | 565..871 | 574..880 | 1535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5190-RA | 1453 | CG5190-RA | 93..983 | 9..899 | 4410 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18451376..18452266 | 9..899 | 4360 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:28:58 has no hits.
MXO03467.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:37:07 Download gff for
MXO03467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5190-PA | 1..891 | 9..899 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:29:57 Download gff for
MXO03467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5190-RA | 93..983 | 9..899 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:17:17 Download gff for
MXO03467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5190-RA | 93..983 | 9..899 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:17:17 Download gff for
MXO03467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18451376..18452266 | 9..899 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:29:57 Download gff for
MXO03467.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14338881..14339771 | 9..899 | 99 | | Plus |
