MXO03470.5prime Sequence
588 bp (584 high quality bases) assembled on 2007-06-15
> MXO03470.5prime
CAGTCGACATGTCGGATGTGGACTCGGATGGCGAGGAGCCAACCCGGAAA
ACGGGCACCAATGCACTGGATGAGTTCCGGGAGAACTGGCAGCGGGAGCT
GCAGGAACACACAACAAACACTGGATCCAGGAGCCATTCCGAGGCTGGAG
ATCGCCTCACGGCGGCCAATTCCAATCTCAGCGAGGCTGATCTACTGCAG
GCCAAGGCGGAGAGTCTCTATCGGACCGCTGTGCAGCTGGAGCAGCGTGG
CAAGGTCTACGACGCACTACCCTTCTACAGGAAGGCCACCCAAATCGTTC
CGGATATTGAGTTCAGGTTCTACGAGCAGCAGAAGCAAAAGCTCAGCAAC
GATGTCAGCAAGAAGTACCTCAATCTGGCTAACGATTTGGCCAACCAATT
GGATCTAGGTCAGTCGGATGGGGAGGAGGTCGTGGACAACCTGTACGAAA
AGTTCCAGCATGATTTGCGTCAGAAAAACATTTACAATGGCAAGATGATA
GCATCCAGCCGTGATGCCAATGTCCTGACCACCGGTCTGCACTTTGCCGA
CCTGCCGCCCGAGATTGTGATGCGCATCCTGCGCTGGG
MXO03470.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:37:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5961-PA | 1329 | CG5961-RA | 1..580 | 9..588 | 2875 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:10:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5961-RB | 1463 | CG5961-RB | 56..636 | 8..588 | 2890 | 99.8 | Plus |
CG5961-RC | 1653 | CG5961-RC | 246..826 | 8..588 | 2890 | 99.8 | Plus |
CG5961-RA | 1658 | CG5961-RA | 251..831 | 8..588 | 2890 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:10:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 12459309..12459889 | 588..8 | 2890 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:10:08 has no hits.
MXO03470.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:37:29 Download gff for
MXO03470.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5961-PA | 1..580 | 9..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:48 Download gff for
MXO03470.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5961-RA | 251..831 | 8..588 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:51:15 Download gff for
MXO03470.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5961-RA | 251..831 | 8..588 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:51:15 Download gff for
MXO03470.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 12459309..12459889 | 8..588 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:48 Download gff for
MXO03470.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 8285031..8285611 | 8..588 | 99 | | Minus |