MXO03471.5prime Sequence
654 bp (547 high quality bases) assembled on 2007-06-15
> MXO03471.5prime
CAGTCGACATGGATGCTACCGCAAGTTCAAAGTTCAGCGATGTGGACGAA
TATGGCTTCAAGCGTGGCGACCACTTCGACTATAACAACTACTCAAAGTT
CATGGATGGTTACCTGAAAACGTTAACGCGGCGCCGCATGAAATGGGAGG
CCATTCTGCAGCAAAATACCGATCTCACCCAGGTGGACGCCAAGCTGAAG
CGGTACATTCGGAAGGGCATTCCTGGTCCATACCGTCCCGACGTCTGGAT
GAAGATATCTGGAGCTGCCGCCGCCCAGCGTCGCTCGCCGGATCTCTTTC
GCAACCTTCTGCGCACCGAGCCCTTCGACAAAGAAATCAGCGATTCCATA
TCAATCGATCTACCTCGTACCTTCCCCGACAATATTCACTTCGATATGAA
GAAGCAGCGGTTGTACAACATTCTCATCGCCTACGCCCATCACAATCGGG
ACGTGGGTTACTGCCAAGGTCTTAACTACATAGCCGGCCTCCTGTTGATC
GTCACCGACGATGAGGAGAAGTCCTTTTGGCTGCTCAAGCATATCGTTGA
AAACATCGTGCCGCAATACCATTCCCATAATATGGCCCATCTGCTGAGGG
ATCTGGCCGTGTTCCGCGAATTGGTCATCCGGCGAATTCCCGCTGTAAAT
CGGC
MXO03471.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:37:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5916-PA | 993 | CG5916-RA | 1..646 | 9..654 | 3205 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5916-RB | 2396 | CG5916-RB | 534..1179 | 9..654 | 3215 | 99.8 | Plus |
| CG5916-RA | 2146 | CG5916-RA | 531..1176 | 9..654 | 3215 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16147741..16148359 | 36..654 | 3080 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:11:01 has no hits.
MXO03471.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:37:35 Download gff for
MXO03471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5916-PA | 1..646 | 9..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:37 Download gff for
MXO03471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5916-RA | 536..1189 | 1..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:50:15 Download gff for
MXO03471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5916-RA | 523..1176 | 1..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:15 Download gff for
MXO03471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16147743..16148359 | 38..654 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:37 Download gff for
MXO03471.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11973465..11974081 | 38..654 | 99 | | Plus |
