MXO03487.5prime Sequence
820 bp (580 high quality bases) assembled on 2007-06-15
> MXO03487.5prime
CAGTCGACATGAGTGGCGCACAGCGGAATCAGGATCGCAAGATCGTTGTC
ATCGGAGCAGGAGCCTCGGGTGTGGCCTGTGCCACCAAACTGCTGGAATT
GGGCTTTCAGAATGTGCTCGTCGTGGAGGCGGAGGATCGTCTAGGTGGCC
GCATACACACTATACCCTTTGCGGACAACGTCATTGATCTGGGTGCCCAA
TGGTGTCATGGGGAACGGGACAACATTGTGTACGAACTGACACGGAAACA
GGATGAGGAGCTGCTGGAGTCGACGGGTCCGGTCTACGAAAACTATGAGT
GCGTCCGCTCCAACGGAGATGTGGTACCGGAAGAGGTATCTAGTCGCCTG
AAAGCCATCGTCGGGGATTCACTGGTCACCCGGCAACTGGAGCTGCGTCA
CTGCAGCGGTTCCTTGGGCAGCTATCTGACCAACAAGTTTTACGACACTC
TCCGGCGTCCGGAAAACTCCGATATAGACGCAGAGGTGGCCAGTGAGTTC
TTTGTCAACTATCAGAAATTCGAGAACTCCGTCGAGGCCTCGGATACGCT
AGAACAAGTTTCGGGACGAGGTTACCTGGACTANTTGGGAGTGCGAGGGC
GATATCCTGCTAAACTGGAAGGACAAGGGCTATGTGGAGCTTCTACGGCT
TCTCATGCGCTCCAGGGAGTTAAATGTGGAGCATGGAGTTCTGGAGCAGC
GTCTCCTGCTTGGCACTCGTGTTGTGAAGATCAACTGGAATCGGAACGAC
GGACGCGTGGAACTTCAATGAGCAATGGAGAGACCTGTATAGCTGACCAT
GTGGTGGTCACGGTTTCATT
MXO03487.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:38:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7737-PA | 1530 | CG7737-RA | 1..575 | 9..583 | 2875 | 100 | Plus |
| CG7737-PA | 1530 | CG7737-RA | 576..759 | 585..768 | 920 | 100 | Plus |
| CG7737-PA | 1530 | CG7737-RA | 759..812 | 767..820 | 270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:05:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7737-RB | 2416 | CG7737-RB | 257..1068 | 9..820 | 4015 | 99.8 | Plus |
| CG7737-RA | 2317 | CG7737-RA | 158..969 | 9..820 | 4015 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:05:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11224587..11225398 | 9..820 | 3965 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-28 22:05:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmir\worf | 4174 | Dmir\worf WORF 4174bp Derived from AY144572. | 2827..2868 | 366..407 | 111 | 73.8 | Plus |
MXO03487.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:38:35 Download gff for
MXO03487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7737-PA | 1..812 | 9..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:00 Download gff for
MXO03487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7737-RA | 153..969 | 1..820 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:58:33 Download gff for
MXO03487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7737-RA | 153..969 | 1..820 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:58:33 Download gff for
MXO03487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11224582..11225398 | 1..820 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:00 Download gff for
MXO03487.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7112087..7112903 | 1..820 | 99 | | Plus |
