MXO03492.5prime Sequence
572 bp (496 high quality bases) assembled on 2007-06-15
> MXO03492.5prime
CAGTCGACATGGCACTACGCGTGGCAGGACTCTTCCTGAAGAAGGAGCTG
GTGGCTCCCGCAACACAGCAGCTGCGTCTGCTGCGTACTGGCAATACCAC
CCGCTCCCAGTTCTTGGCCAACTCCCCCAACACGGCTCTAGACAAGAGCA
TTCTGCAGAGGTACCGCAACCTGGAAACGCCGGCCAATCGAGTGCAGGCT
ACTTACTTATGGATCGACGGTACCGGCGAGAACATTCGCCTCAAGGATCG
CGTTTTGGACAAAGTACCCAGCTCCGTGGAGGACTTGCCGGATTGGCAGT
ACGACGGCAGTTCCACCTACCAGGCCCATGGCGAGAACTCGGACACCACG
CTCAAGCCACGCGCCATATATCGCGATCCCTTTAAGCCGGGAAAGAACGA
CGTAATTGTCCTGTGCGACACCTACAGCGCCGACGGCAAGCCGACGGCGT
CCAACAAGCGTGCCGCGTTCCAGGCAGCCATTGACCTAATTAGCGATCAG
GAGCCCTGGTTCGGCATTGAGCAAGAATACACTTTATTAGACGTGGACGG
ACGTCCCTTCGGCTGGCCGGAG
MXO03492.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:39:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2718-PC | 1200 | Gs1-RC | 1..564 | 9..572 | 2820 | 100 | Plus |
| CG2718-PB | 1200 | Gs1-RB | 1..564 | 9..572 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:14:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Gs1-RD | 1699 | CG2718-RD | 187..750 | 9..572 | 2820 | 100 | Plus |
| Gs1-RB | 2176 | CG2718-RB | 187..750 | 9..572 | 2820 | 100 | Plus |
| Gs1-RC | 2396 | CG2718-RC | 407..970 | 9..572 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:14:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 132483..133046 | 9..572 | 2820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:14:41 has no hits.
MXO03492.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-06-29 15:39:04 Download gff for
MXO03492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2718-PB | 1..564 | 9..572 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:38 Download gff for
MXO03492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gs1-RC | 407..970 | 9..572 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:06 Download gff for
MXO03492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Gs1-RC | 407..970 | 9..572 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:06 Download gff for
MXO03492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 132483..133046 | 9..572 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:38 Download gff for
MXO03492.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 132483..133046 | 9..572 | 100 | | Plus |
