MXO03504.5prime Sequence
831 bp (583 high quality bases) assembled on 2007-07-18
> MXO03504.5prime
CAATCGACATGGCCAACATTCTAAGTTTTACCATCTTTATGGCTGCCATT
GCTATTGGACTGGCTTTAGCCACAACAACGACAGCAAGTACAAGGACACC
CATGCCCACTTCCACTGAAAAATCCATGGAAAAGGACGATCCCATGGAGT
CCTTGGAACGCCGTGACAAACGCCAATTGACCGCCAATGGTGGCCAGAGC
AGCCTGGCTGGTTCCAGCGGCAACTATCCCGTTTTCTTCGATGGCCTTAA
TGTGAATCCCCCGCTGCAGCCACTGCCGCCACTGCAGCAACTTCAGCCTC
TGCAGCCATTGCAGCCGATTACGGTGGTGACTCCTGTGGCCTCCAGTTCG
AATGCCCAGAGCCAGCAGCCGCAGTCCGGCTGGCTGCCTCAGTTTAACCA
GAATCTTCCACTTATCGGAACCTGGGTGGGTGGCCTGCCCAATTTGATCA
ACGGCCTGGGACTCGGTTCGCTAAACGGCGGCTTCGGCACTCTGGGCGGC
CTGAATCTGGGCAACCTGGGACTGGGTGCAGTGGCGCCGGTGGCCGCGGT
GCCGGGCCAACTGCTCGGCTCGTCACCCAATCCCCAGACCACATGCCCAC
TCACCCAAAAGCTCAACTGCCGCTGTGAGCCGCTCGTTCAGCTGCCGGGC
CTGAAGCCCAGTTCCAATCCACTGAGGACGCAGCTGGTGCAGATCATGCG
GCAGAATGCGCGGAAGATCGAGGACGGTTCGCAAGAGGTGCGCGTAATCC
TGAGCAGCGGACATGTGATCTACCAGCGGACGGCCAAGGATCGCGACCAG
AGTGGCTACCTTGCCATGAGAATTCAGTCGG
MXO03504.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:37:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32631-PA | 939 | CG32631-RA | 1..823 | 9..831 | 3990 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32631-RA | 1289 | CG32631-RA | 76..900 | 7..831 | 4050 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13556825..13557477 | 179..831 | 3190 | 99.2 | Plus |
| X | 23542271 | X | 13556547..13556719 | 7..179 | 865 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:43:53 has no hits.
MXO03504.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:37:35 Download gff for
MXO03504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-PA | 1..823 | 9..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:37 Download gff for
MXO03504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-RA | 69..900 | 1..831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:06 Download gff for
MXO03504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32631-RA | 69..900 | 1..831 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:06 Download gff for
MXO03504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13556540..13556719 | 1..179 | 98 | -> | Plus |
| X | 13556826..13557477 | 180..831 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:37 Download gff for
MXO03504.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13450573..13450752 | 1..179 | 98 | -> | Plus |
| arm_X | 13450859..13451510 | 180..831 | 99 | | Plus |
