MXO03530.5prime Sequence
874 bp (805 high quality bases) assembled on 2007-07-18
> MXO03530.5prime
CAGTCGACATGCTGTTGCGTCGCGTTCTGGGCTACGGAGTAGTCGGCGCC
GGACTGGCCTCCGCCGGCTGGAGCCTGCACACCAACGACTACGATCCCAA
CTCACTCGGAATCGTCCGGCTGTCGCGATCCGCCGCCGCCGTCGTGGACG
TGGCACTCACCTACAAGCGGGAACTTTACTACAAGGAATGGGATAAGGAG
ACGCCCGAGTACAAGGCGGAAAAGAGCCGGGTCCACAAGATAGCCGCCGA
GAAGCTACTTCAGCTGATCTGCATAAACAAGGGTGTCTACATCAAGGTGG
GCCAGCACATAGGGGCCTTGGAGTACCTGCTACCCAAGGAGTTTGTGCAG
ACCATGAAGGTACTTCACTCCGATGCGCCGCAAAACCCCATTGAGGACCT
GTATAAGGTAATCCGACAGGATCTGCACTGCAATCCGGAAGAAATCTTCG
ACAGCTTCGAGAGGGAGCCGCTGGGAACTGCTTCCCTTGCCCAGGTACAT
AAGGCGCGCCTCAAGACCGGCGAGCTGGTGGCCGTGAAGGTGCAACATCC
CTACGTTAAGGGTAACTCCCGCGTTGACATGAAGACCATGGAACTGGCCG
TTAATGTGCTGGCTCGGATATTTCCCGACTTCAAGATCCACTGGCTGGTT
GAGGAGTCTAAAAAGAACTTGCCAATCGAACTCGATTTCCTAAACGAGGG
ACGTAACGCCGAGAAAGTAGCCAAGCAGTTCAAGAAGTACTCGTGGCTTC
GGGTGCCCAAGATATACTGGAAATATAGCTCTTCTCGAGTCCTAGTCATG
GAGTACCTGGAGGGTGGGCATGTCACGGACTTGGACTACATACGGCGAAA
CAAAATTGACTCATTTGCNGTGGC
MXO03530.5prime Blast Records
Blast to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:39:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3608-PA | 1557 | CG3608-RA | 1..866 | 9..874 | 4311 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3608-RB | 1901 | CG3608-RB | 294..1159 | 9..874 | 4319 | 99.9 | Plus |
| CG3608-RA | 1736 | CG3608-RA | 129..994 | 9..874 | 4319 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:28:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24612175..24613040 | 9..874 | 4319 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:28:13 has no hits.
MXO03530.5prime Sim4 Records
Sim4 to dmel-all-CDS-r5.1.fasta performed 2007-08-06 12:39:43 Download gff for
MXO03530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3608-PA | 1..866 | 9..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:45:15 Download gff for
MXO03530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3608-RA | 122..994 | 1..874 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:09:21 Download gff for
MXO03530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3608-RA | 122..994 | 1..874 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:09:21 Download gff for
MXO03530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24612168..24613040 | 1..874 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:45:15 Download gff for
MXO03530.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20499691..20500563 | 1..874 | 99 | | Plus |
